RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 HOXA1P49639 335 aaPredicted RBP10.44□□□□□ -0.74
LINC00346-201ENST00000538077 IKZF1Q13422 519 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 ZNF674Q2M3X9 581 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 ESPNLQ6ZVH7 1005 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 MED25Q71SY5 747 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 AAED1Q7RTV5 226 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 GPR149Q86SP6 731 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 GLB1L2Q8IW92 636 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 ZNF566Q969W8 418 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 BORCS7Q96B45 105 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 VRK1Q99986 396 aaPredicted RBP10.44□□□□□ -0.74
LINC00346-201ENST00000538077 NRSN2Q9GZP1 204 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 ARRDC1-AS1Q9H2J1 176 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 KLHL42Q9P2K6 505 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 SLC23A2Q9UGH3 650 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 WASH4PA8MWX3 477 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 B4DXG7 233 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 SERPINA7P05543 415 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 IL7P13232 177 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 RPA2P15927 270 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 GPX3P22352 226 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 EFNA3P52797 238 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 MZT1Q08AG7 82 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 FOXC1Q12948 553 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 OR5AS1Q8N127 324 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 GPR148Q8TDV2 347 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 RLIMQ9NVW2 624 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 TRAPPC2LQ9UL33 140 aa10.44□□□□□ -0.74
LINC00346-201ENST00000538077 A0A0G2JMP0 313 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 TRBV4-1A0A0J9YWV2 114 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 PIP5K1CO60331 668 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 GPR75O95800 540 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 MMP2P08253 660 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 RPS17P08708 135 aaKnown RBP10.43□□□□□ -0.74
LINC00346-201ENST00000538077 WNT4P56705 351 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 GPR85P60893 370 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 HES1Q14469 280 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 LEXMQ3ZCV2 418 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 CPZQ66K79 652 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 OR4M2Q8NGB6 313 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 TOX2Q96NM4 488 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 PRDM9Q9NQV7 894 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 LOC105369274A0A096LPK9 316 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 A0A1B0GTW7 788 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 LOC285095A0A1B0GVY8 99 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 LILRB5O75023 590 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 GRPP07492 148 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 ENPP1P22413 925 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 RRADP55042 308 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 BIDP55957 195 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 HBA1P69905 142 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 OR4N4Q8N0Y3 316 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 ASB11Q8WXH4 323 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 ZNF578Q96N58 590 aaPredicted RBP10.43□□□□□ -0.74
LINC00346-201ENST00000538077 FAM117AQ9C073 453 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 OR51E2Q9H255 320 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 INTS6Q9UL03 887 aaKnown RBP10.43□□□□□ -0.74
LINC00346-201ENST00000538077 B4GAT1O43505 415 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 CST5P28325 142 aaPredicted RBP10.43□□□□□ -0.74
LINC00346-201ENST00000538077 CHRNB4P30926 498 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 PRSS3P35030 304 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 NUDT1P36639 197 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 ACSM3Q53FZ2 586 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 CNIH2Q6PI25 160 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 ZNF687Q8N1G0 1237 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 PSMF1Q92530 271 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 UBXN10Q96LJ8 280 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 FER1L6-AS2Q96M78 137 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 SORT1Q99523 831 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 C1QTNF2Q9BXJ5 285 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 ZNF264O43296 627 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 FGL1Q08830 312 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 DEFB109BQ30KR1 87 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 STK35Q8TDR2 534 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 TSPAN10Q9H1Z9 355 aaPredicted RBP10.43□□□□□ -0.74
LINC00346-201ENST00000538077 MKS1Q9NXB0 559 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 SLC6A5Q9Y345 797 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 FOXE1O00358 373 aaPredicted RBP10.43□□□□□ -0.74
LINC00346-201ENST00000538077 OR7A17O14581 309 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 PTHP01270 115 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 F11P03951 625 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 MTHFD2P13995 350 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 PTGER4P35408 488 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 RPP30P78346 268 aaKnown RBP10.43□□□□□ -0.74
LINC00346-201ENST00000538077 BCL2A1Q16548 175 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 HEPHL1Q6MZM0 1159 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 ZNF322Q6U7Q0 402 aaPredicted RBP10.43□□□□□ -0.74
LINC00346-201ENST00000538077 PAQR9Q6ZVX9 377 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 MEPCEQ7L2J0 689 aaKnown RBP10.43□□□□□ -0.74
LINC00346-201ENST00000538077 TPRA1Q86W33 373 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 TSNAXQ99598 290 aaKnown RBP10.43□□□□□ -0.74
LINC00346-201ENST00000538077 SLAMF8Q9P0V8 285 aa10.43□□□□□ -0.74
LINC00346-201ENST00000538077 NRG2O14511 850 aaPredicted RBP10.42□□□□□ -0.74
LINC00346-201ENST00000538077 ARHGEF15O94989 841 aa10.42□□□□□ -0.74
LINC00346-201ENST00000538077 RAB3DO95716 219 aa10.42□□□□□ -0.74
LINC00346-201ENST00000538077 ICAM2P13598 275 aa10.42□□□□□ -0.74
LINC00346-201ENST00000538077 ALKBH6Q3KRA9 238 aa10.42□□□□□ -0.74
LINC00346-201ENST00000538077 ESCO2Q56NI9 601 aa10.42□□□□□ -0.74
LINC00346-201ENST00000538077 CHDHQ8NE62 594 aaPredicted RBP10.42□□□□□ -0.74
LINC00346-201ENST00000538077 FAM83FQ8NEG4 500 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms