RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 HIST1H2BAQ96A08 127 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 BCO1Q9HAY6 547 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 BARX1Q9HBU1 254 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 RHCGQ9UBD6 479 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 CCL27Q9Y4X3 112 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 TRBC2A0A5B9 178 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 J3KTA2 159 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 BCL2L11O43521 198 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 OR2F2O95006 317 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 SERPIND1P05546 499 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 OR8U8P0C7N1 319 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 RCC1P18754 421 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 AGAP20933 346 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 HNRNPKP61978 463 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 RPS24P62847 133 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 OR2F1Q13607 317 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 NDUFAF6Q330K2 333 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 LY6G5CQ5SRR4 150 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 CEACAM20Q6UY09 585 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 RNF165Q6ZSG1 346 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 RABEPKQ7Z6M1 372 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 ZNF511Q8NB15 262 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 OR11G2Q8NGC1 345 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 OR6K2Q8NGY2 324 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 MAFIPQ8WZ33 124 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 MAL2Q969L2 176 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 ELSPBP1Q96BH3 223 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 CPNE2Q96FN4 548 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 APOLD1Q96LR9 279 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 SOX7Q9BT81 388 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 DUSP26Q9BV47 211 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 MRPL37Q9BZE1 423 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 H2AFY2Q9P0M6 372 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 FBXL3Q9UKT7 428 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 CXorf65A6NEN9 183 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 MARCH11A6NNE9 402 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 F5H0A9 414 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 I6L893 689 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 MAFKO60675 156 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 MED6O75586 246 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 ABLIM3O94929 683 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 FGF1P05230 155 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 RPL34P49207 117 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 HMGA2P52926 109 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 OC90Q02509 493 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 GINS1Q14691 196 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 RGNQ15493 299 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 SIRPB2Q5JXA9 342 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 THEM4Q5T1C6 240 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 OR10K2Q6IF99 312 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 APOOLQ6UXV4 268 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 GAL3ST3Q96A11 431 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 ZNF707Q96C28 371 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 CMTM7Q96FZ5 175 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 POM121Q96HA1 1249 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 UQCC1Q9NVA1 299 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 TMEM248Q9NWD8 314 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 KLHL9Q9P2J3 617 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 NDOR1Q9UHB4 597 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 MIA3Q5JRA6 1907 aa10.11□□□□□ -0.79
CLSTN3-207ENST00000537408 FFAR2O15552 330 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 F12P00748 615 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 SDHBP21912 280 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 CXCR3P49682 368 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 POLR2LP62875 67 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 TRAM1Q15629 374 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 MPPED2Q15777 294 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 ALG11Q2TAA5 492 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 NCMAPQ5T1S8 102 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 OR2G2Q8NGZ5 317 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 PAQR8Q8TEZ7 354 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 HMCESQ96FZ2 354 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 RSRP1Q9BUV0 290 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 SLC39A8Q9C0K1 460 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 KRCC1Q9NPI7 259 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 C2orf42Q9NWW7 574 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 ABRACLQ9P1F3 81 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 TTC3P53804 2025 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 NPC1O15118 1278 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 CLDN9O95484 217 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 HCKP08631 526 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 UQCRC2P22695 453 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 MAPK8P45983 427 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 ZNF234Q14588 700 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 CPSF6Q16630 551 aaKnown RBP eCLIP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 POM121L1PQ3SYA9 428 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 MINDY4Q4G0A6 757 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 FAM78AQ5JUQ0 283 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 FBXL22Q6P050 247 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 IL34Q6ZMJ4 242 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 FAM98AQ8NCA5 519 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 FCAMRQ8WWV6 532 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 OPN3Q9H1Y3 402 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 ZNF282Q9UDV7 671 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 TESQ9UGI8 421 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 PPT2Q9UMR5 302 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 B3GALT4O96024 378 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 ANKRD34CP0C6C1 535 aa10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 HOXB9P17482 250 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-207ENST00000537408 CCR8P51685 355 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms