RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ACRV1P26436 265 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 S100GP29377 79 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 PBX2P40425 430 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 FRKP42685 505 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-213ENST00000537002 AFF3P51826 1226 aaKnown RBP5.05□□□□□ -1.6
PTPRD-213ENST00000537002 IRF4Q15306 451 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 HEPHL1Q6MZM0 1159 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 TTLL10Q6ZVT0 673 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 ABHD13Q7L211 337 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 SLC16A9Q7RTY1 509 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 C6orf120Q7Z4R8 191 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF280BQ86YH2 543 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 THAP4Q8WY91 577 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 OR5P2Q8WZ92 322 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 SMPDL3BQ92485 455 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 GPATCH2Q9NW75 528 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 PARPBPQ9NWS1 579 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 TAS2R5Q9NYW4 299 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 LAMP5Q9UJQ1 280 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 LSM5Q9Y4Y9 91 aaKnown RBP5.05□□□□□ -1.6
PTPRD-213ENST00000537002 DSPPQ9NZW4 1301 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 LRRC37AA6NMS7 1700 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 DUXAA6NLW8 204 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 RNASET2O00584 256 aaKnown RBP5.05□□□□□ -1.6
PTPRD-213ENST00000537002 SLC34A2O95436 690 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 AKAIN1P0CW23 69 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 MPIP34949 423 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 LIPJQ5W064 366 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 C12orf73Q69YU5 71 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 TMCO2Q7Z6W1 182 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM200AQ86VY9 491 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 RNF175Q8N4F7 328 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 SMIM14Q96QK8 99 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 SLC6A16Q9GZN6 736 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 EGLN3Q9H6Z9 239 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 CXXC1Q9P0U4 656 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-213ENST00000537002 FTSJ1Q9UET6 329 aa5.05□□□□□ -1.6
PTPRD-213ENST00000537002 A0A0B4J203 849 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 RTCAO00442 366 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ADAM10O14672 748 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CDC123O75794 336 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 AHSA1O95433 338 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 GLAP06280 429 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SYPP08247 313 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 OR8U9P0C7N5 309 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ELNP15502 786 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SHC1P29353 583 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SOX4Q06945 474 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CBFBQ13951 182 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 RBM39Q14498 530 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 RAB11BQ15907 218 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 RNASE10Q5GAN6 216 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ADGRF1Q5T601 910 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SFXN4Q6P4A7 337 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 FIP1L1Q6UN15 594 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CXCL17Q6UXB2 119 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SLC16A13Q7RTY0 426 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF551Q7Z340 670 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 DEFB128Q7Z7B8 93 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SLC35F2Q8IXU6 374 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 OR8D1Q8WZ84 308 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 PHB2Q99623 299 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 C5AR2Q9P296 337 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 LOC390937A0A1W2PQ73 354 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SYN3O14994 580 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 NDUFS4O43181 175 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 GJB3O75712 270 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CBX7O95931 251 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ANXA7P20073 488 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 HTRA4P83105 476 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SLC6A19Q695T7 634 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 VASNQ6EMK4 673 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 H3F3CQ6NXT2 135 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 DPPA2Q7Z7J5 298 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 OR4K13Q8NH42 304 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 GLYATL2Q8WU03 294 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 FUBP3Q96I24 572 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF582Q96NG8 517 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 FAM83CQ9BQN1 747 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 C20orf24Q9BUV8 137 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 BARHL1Q9BZE3 327 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 DPH1Q9BZG8 443 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CYP8B1Q9UNU6 501 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SLC38A8A6NNN8 435 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 PIRO00625 290 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 OR2A4O95047 310 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 RAB40ALP0C0E4 278 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 TFPIP10646 304 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 DRD2P14416 443 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 EIF1AXP47813 144 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CLDN12P56749 244 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 COL9A2Q14055 689 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 GSG1Q2KHT4 349 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 PIP5KL1Q5T9C9 394 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 AWAT2Q6E213 333 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 PODNL1Q6PEZ8 512 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CHST9Q7L1S5 443 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CPXM2Q8N436 756 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 NAXEQ8NCW5 288 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 OR4C15Q8NGM1 316 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms