RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 BARX1Q9HBU1 254 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CTPS2Q9NRF8 586 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 NPAP1Q9NZP6 1156 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CHRNA9Q9UGM1 479 aa17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 NOSIPQ9Y314 301 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ZNF716A6NP11 495 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 BCAS1O75363 584 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 RAD51DO75771 328 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 PMS2P2O95744 297 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CD8AP01732 235 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 IGHV3-9P01782 118 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 FKBP2P26885 142 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ABCE1P61221 599 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 AP1ARQ63HQ0 302 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 SAXO2Q658L1 398 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 FRRS1Q6ZNA5 592 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 GRINAQ7Z429 371 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 DTX2Q86UW9 622 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 TESCQ96BS2 214 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ARL5BQ96KC2 179 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 HDGFL3Q9Y3E1 203 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 RAP2CQ9Y3L5 183 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 YLPM1P49750 1951 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CUBNO60494 3623 aa17.36■□□□□ 0.37
TNFRSF1B-204ENST00000536782 GOLGA8QA0A0J9YX86 632 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CIB4A0PJX0 185 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 GOLGA8OA6NCC3 632 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 GOLGA8NF8WBI6 632 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 GPR171O14626 319 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 BIRC5O15392 142 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 NDUFS7O75251 213 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CHI3L1P36222 383 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CLK1P49759 484 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 KHKP50053 298 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 RPL14P50914 215 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 PHC1P78364 1004 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 KCNJ10P78508 379 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 HPCAP84074 193 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 FUT5Q11128 374 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 DPY19L1Q2PZI1 675 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 GPAT3Q53EU6 434 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 AGAP6Q5VW22 663 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 TMEM108Q6UXF1 575 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 DNM1P46Q6ZS02 220 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ARFGAP2Q8N6H7 521 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 PIGXQ8TBF5 258 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ZG16BQ96DA0 208 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 NEURL3Q96EH8 262 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 EXOSC3Q9NQT5 275 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 GDF2Q9UK05 429 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 MGAT4BQ9UQ53 548 aa17.35■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CCT8L1PA6NM43 557 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 DNPH1O43598 174 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ADAM11O75078 769 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 SNUPNO95149 360 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CLNS1AP54105 237 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 CASP8Q14790 479 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 NRF1Q16656 503 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 KRT71Q3SY84 523 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 SPANXN4Q5MJ08 99 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 KLHL17Q6TDP4 642 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 HMGN2P46Q86SG4 172 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ADGRG3Q86Y34 549 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 PIAS4Q8N2W9 510 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 OR52N5Q8NH56 324 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 DNAJA3Q96EY1 480 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 SLC35A5Q9BS91 424 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 OR11A1Q9GZK7 315 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 C20orf27Q9GZN8 174 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 ASB6Q9NWX5 421 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 MARCOQ9UEW3 520 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 B3GALT5Q9Y2C3 310 aa17.34■□□□□ 0.37
TNFRSF1B-204ENST00000536782 TLX2O43763 284 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 MRPL33O75394 65 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 LBPP18428 481 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 PTNP21246 168 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 PTAFRP25105 342 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 MAGEA8P43361 318 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 HTR3AP46098 478 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SLC1A6P48664 564 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 IDH2P48735 452 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SLC16A1P53985 500 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 OR2B6P58173 313 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CHRNEQ04844 493 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CXXC5Q7LFL8 322 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CROCCP2Q86T23 111 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 LRRC34Q8IZ02 419 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 KIRREL3Q8IZU9 778 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TAS2R16Q9NYV7 291 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TMEM181Q9P2C4 612 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 MALT1Q9UDY8 824 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 POU2F3Q9UKI9 436 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SLC25A15Q9Y619 301 aa17.33■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CLDN24A6NM45 220 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 HMGN4O00479 90 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CD5LO43866 347 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CCNA2P20248 432 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 S100A3P33764 101 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms