RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SF3B4Q15427 424 aaKnown RBP eCLIP10.84□□□□□ -0.67
CHD4-203ENST00000535717 NSUN5P2Q63ZY6 315 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 C3orf33Q6P1S2 294 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 ESPNLQ6ZVH7 1005 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 CBLL1Q75N03 491 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 VTCN1Q7Z7D3 282 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 RANBP3LQ86VV4 465 aaPredicted RBP10.84□□□□□ -0.67
CHD4-203ENST00000535717 CARM1Q86X55 608 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 EID3Q8N140 333 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 ARHGAP24Q8N264 748 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 OR2V1Q8NHB1 315 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 FAM162AQ96A26 154 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 C3orf49Q96BT1 292 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 CCDC120Q96HB5 630 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 ZNF845Q96IR2 970 aaPredicted RBP10.84□□□□□ -0.67
CHD4-203ENST00000535717 TPD52L3Q96J77 140 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 UCN2Q96RP3 112 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 MCHR1Q99705 422 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 GORASP2Q9H8Y8 452 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 CALHM2Q9HA72 323 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 ADPRHL2Q9NX46 363 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 CLCF1Q9UBD9 225 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 CHRNA9Q9UGM1 479 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 PRPF19Q9UMS4 504 aaKnown RBP10.84□□□□□ -0.67
CHD4-203ENST00000535717 SLC9A8Q9Y2E8 581 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 SNX13Q9Y5W8 968 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 KIAA1549Q9HCM3 1950 aa10.84□□□□□ -0.67
CHD4-203ENST00000535717 TMEM72A0PK05 275 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 GJE1A6NN92 205 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 ARPC2O15144 300 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 GYG2O15488 501 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 CXCL13O43927 109 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 GMNNO75496 209 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 PDE5AO76074 875 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 AGFG2O95081 481 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 TGM6O95932 706 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 LDLRP01130 860 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 RNF224P0DH78 156 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 CXCR1P25024 350 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 EIF1AXP47813 144 aaKnown RBP10.83□□□□□ -0.68
CHD4-203ENST00000535717 OR1E2P47887 323 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 RPS3AP61247 264 aaKnown RBP10.83□□□□□ -0.68
CHD4-203ENST00000535717 NCALDP61601 193 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 ADORA2A-AS1P86434 159 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 OR1Q1Q15612 314 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 SYT14P1Q58G82 188 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 HBMQ6B0K9 141 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 TMEM211Q6ICI0 200 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 MTFR2Q6P444 385 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 CHMP1BQ7LBR1 199 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 ATG4DQ86TL0 474 aaPredicted RBP10.83□□□□□ -0.68
CHD4-203ENST00000535717 TSPYL5Q86VY4 417 aaPredicted RBP10.83□□□□□ -0.68
CHD4-203ENST00000535717 FAM26EQ8N5C1 309 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 OR10D3Q8NH80 312 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 PHF10Q8WUB8 498 aaKnown RBP10.83□□□□□ -0.68
CHD4-203ENST00000535717 SLC25A43Q8WUT9 341 aaPredicted RBP10.83□□□□□ -0.68
CHD4-203ENST00000535717 LZICQ8WZA0 190 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 OSTF1Q92882 214 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 CLPTM1LQ96KA5 538 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 OR5B2Q96R09 309 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 BTBD10Q9BSF8 475 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 THTPAQ9BU02 230 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 OR11A1Q9GZK7 315 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 COQ10BQ9H8M1 238 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 TMEM27Q9HBJ8 222 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 DCAF13Q9NV06 445 aaKnown RBP10.83□□□□□ -0.68
CHD4-203ENST00000535717 RPS6KB2Q9UBS0 482 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 MAGEL2Q9UJ55 1249 aa10.83□□□□□ -0.68
CHD4-203ENST00000535717 SPIN1Q9Y657 262 aaPredicted RBP10.83□□□□□ -0.68
CHD4-203ENST00000535717 PHF3Q92576 2039 aaKnown RBP10.83□□□□□ -0.68
CHD4-203ENST00000535717 A0A0B4J2E0 115 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 A0A1B0GX12 115 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 A0A1W2PNR3 127 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 ZC3H12DA2A288 527 aaKnown RBP10.82□□□□□ -0.68
CHD4-203ENST00000535717 MBD3L4A6NDZ8 208 aaPredicted RBP10.82□□□□□ -0.68
CHD4-203ENST00000535717 MBD3L3A6NE82 208 aaPredicted RBP10.82□□□□□ -0.68
CHD4-203ENST00000535717 WIPF3A6NGB9 483 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 MBD3L5A6NJ08 208 aaPredicted RBP10.82□□□□□ -0.68
CHD4-203ENST00000535717 CPSF4LA6NMK7 179 aaKnown RBP10.82□□□□□ -0.68
CHD4-203ENST00000535717 ZNF208O43345 1280 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 ZG16O60844 167 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 TOXO94900 526 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 TFPIP10646 304 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 FKBP2P26885 142 aaKnown RBP10.82□□□□□ -0.68
CHD4-203ENST00000535717 SLC7A1P30825 629 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 MAP2K6P52564 334 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 PER3P56645 1201 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 CARD18P57730 90 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 BNIP2Q12982 314 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 SGCBQ16585 318 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 DNAL1Q4LDG9 190 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 ENTPD8Q5MY95 495 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 ULK3Q6PHR2 472 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 FAM86B1Q8N7N1 296 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 C9orf106Q8NAJ2 232 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 MBD3L2Q8NHZ7 208 aaPredicted RBP10.82□□□□□ -0.68
CHD4-203ENST00000535717 FNDC9Q8TBE3 224 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 DNAJA4Q8WW22 397 aaPredicted RBP10.82□□□□□ -0.68
CHD4-203ENST00000535717 WNT2BQ93097 391 aa10.82□□□□□ -0.68
CHD4-203ENST00000535717 DNAJA3Q96EY1 480 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms