RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 MDFICQ9P1T7 246 aa2.76□□□□□ -1.97
SNHG1-202ENST00000535689 UBQLN2Q9UHD9 624 aa2.76□□□□□ -1.97
SNHG1-202ENST00000535689 RARRES3Q9UL19 164 aa2.76□□□□□ -1.97
SNHG1-202ENST00000535689 FOXA2Q9Y261 457 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-202ENST00000535689 MRPS2Q9Y399 296 aaKnown RBP2.76□□□□□ -1.97
SNHG1-202ENST00000535689 MFHAS1Q9Y4C4 1052 aa2.76□□□□□ -1.97
SNHG1-202ENST00000535689 CROCCQ5TZA2 2017 aa2.76□□□□□ -1.97
SNHG1-202ENST00000535689 HCFC1P51610 2035 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 A0A1W2PRV1 198 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 TRIM49BA6NDI0 452 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 SLC9B1P1A6NJY1 282 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 CCL21O00585 134 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 IDH3BO43837 385 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 KIAA0513O60268 411 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 ADCY5O95622 1261 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 HPRP00739 348 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 CGAP01215 116 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 UGT2B4P06133 528 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 LYNP07948 512 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 XRCC1P18887 633 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 KLK2P20151 261 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 TEAD1P28347 426 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 OR3A1P47881 315 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 SERPINH1P50454 418 aaKnown RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 SRPXP78539 464 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 RBBP4Q09028 425 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 HSPA14Q0VDF9 509 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 NPRL3Q12980 569 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 IRF4Q15306 451 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 INAQ16352 499 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 GOLGA7BQ2TAP0 167 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 WSCD2Q2TBF2 565 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 KRTAP24-1Q3LI83 254 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 HIST2H2AA3Q6FI13 130 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 ZNF770Q6IQ21 691 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 FBXL22Q6P050 247 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 PNCKQ6P2M8 343 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 Q6ZS92 163 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 Q71RC1 249 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 NOTCH2NLQ7Z3S9 236 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 PRSS42Q7Z5A4 293 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 SLC43A2Q8N370 569 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 NAT8LQ8N9F0 302 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 SIDT2Q8NBJ9 832 aaKnown RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 FDCSPQ8NFU4 85 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 UBA3Q8TBC4 463 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 DQX1Q8TE96 717 aaKnown RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 PTP4A1Q93096 173 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 RFT1Q96AA3 541 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 BPIFA2Q96DR5 249 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 C19orf60Q96EN9 201 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 RBM18Q96H35 190 aaKnown RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 EPSTI1Q96J88 318 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 C2orf48Q96LS8 159 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 C9orf72Q96LT7 481 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 ALKBH3Q96Q83 286 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 S1PR3Q99500 378 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 CTRCQ99895 268 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 NLNQ9BYT8 704 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 RAB33BQ9H082 229 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 GANQ9H2C0 597 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 C5orf66Q9H5L9 145 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 UCK1Q9HA47 277 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 ELL3Q9HB65 397 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 FANCEQ9HB96 536 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 ACOXLQ9NUZ1 547 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 MED17Q9NVC6 651 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 DMAC2Q9NW81 257 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 DDIT4Q9NX09 232 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 NUDT4Q9NZJ9 180 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 RCOR3Q9P2K3 495 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 BAIAP2L1Q9UHR4 511 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 VANGL2Q9ULK5 521 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 STAP1Q9ULZ2 295 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 PLCL2Q9UPR0 1127 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 PYGO1Q9Y3Y4 419 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 OR51B4Q9Y5P0 310 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 SNX5Q9Y5X3 404 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 ETV7Q9Y603 341 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 MRPS18BQ9Y676 258 aaKnown RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 PRRC2AP48634 2157 aaKnown RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 INTS1Q8N201 2190 aaKnown RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 FN1P02751 2386 aaKnown RBP2.75□□□□□ -1.97
SNHG1-202ENST00000535689 SPTBP11277 2137 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 PCM1Q15154 2024 aa2.75□□□□□ -1.97
SNHG1-202ENST00000535689 MPDZO75970 2070 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 NCOA6Q14686 2063 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 TRGV8A0A0C4DH27 118 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 A0A0U1RQS6 177 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 A0A1W2PR80 420 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 TMEM129A0AVI4 362 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ZNF732B4DXR9 585 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 C9J4A7 227 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 H3BMM5 538 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 M0QYV0 167 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 PSMD11O00231 422 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 EEF2KO00418 725 aaKnown RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ARPC1BO15143 372 aaKnown RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 KDELR3O43731 214 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 VEGFDO43915 354 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms