RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CFAP161Q6P656 301 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 TRAT1Q6PIZ9 186 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 SPINT4Q6UDR6 99 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 LYPD2Q6UXB3 125 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 ZNF562Q6V9R5 426 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 Q6ZSA8 131 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 CYS1Q717R9 158 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 BNIPLQ7Z465 357 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 GOLGA7Q7Z5G4 137 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 PAQR7Q86WK9 346 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 METTL23Q86XA0 190 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 RIMKLAQ8IXN7 391 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 ZNF683Q8IZ20 524 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 CLYBLQ8N0X4 340 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 LGI3Q8N145 548 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 OR2L3Q8NG85 312 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 OR7G3Q8NG95 312 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 OR4F15Q8NGB8 312 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 OR4A16Q8NH70 328 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 PAQR8Q8TEZ7 354 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 CORO2AQ92828 525 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 VMP1Q96GC9 406 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 FCRL1Q96LA6 429 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 P2RY13Q9BPV8 354 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 KLHDC3Q9BQ90 382 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 NDUFAF3Q9BU61 184 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 NFKBIZQ9BYH8 718 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 FRMD8P1Q9BZ68 369 aaPredicted RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 COMMD4Q9H0A8 199 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 DDX47Q9H0S4 455 aaKnown RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 TRPV6Q9H1D0 765 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 MYH16Q9H6N6 1097 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 SGK2Q9HBY8 427 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 TM9SF3Q9HD45 589 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 KLHL28Q9NXS3 571 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 DHCR7Q9UBM7 475 aaKnown RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 CRLS1Q9UJA2 301 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 CDH7Q9ULB5 785 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 BAHCC1Q9P281 2608 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 CENPJQ9HC77 1338 aaPredicted RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 RPAP1Q9BWH6 1393 aaPredicted RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 NPC1L1Q9UHC9 1359 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 TNS2Q63HR2 1409 aa0.03□□□□□ -2.41
COPB1-212ENST00000534771 DOCK9Q9BZ29 2069 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 ZNF407Q9C0G0 2248 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 IGHV5-10-1A0A0J9YXX1 117 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 TMEM223A0PJW6 202 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 ZNF98A6NK75 572 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 INS-IGF2F8WCM5 200 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 C3orf84H3BNL1 204 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 H7C0S8 307 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 UBXN8O00124 270 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 CACNB4O00305 520 aaPredicted RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 AGPAT2O15120 278 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 RAD51BO15315 384 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 SLC31A2O15432 143 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 MBTPS2O43462 519 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 ZNF207O43670 478 aaKnown RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 SYNGR4O95473 234 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 HSPA4LO95757 839 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 LGI1O95970 557 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 CCNE2O96020 404 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 UBTFL1P0CB47 393 aaPredicted RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 ATP6V1B2P21281 511 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 GLP1RP43220 463 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 VDAC2P45880 294 aaPredicted RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 GYG1P46976 350 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 SLC11A1P49279 550 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 ARRB1P49407 418 aaPredicted RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 GDI2P50395 445 aaKnown RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 CASP9P55211 416 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 DLX1P56177 255 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 CCZ1BP86790 482 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 CCZ1P86791 482 aaPredicted RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 SCN1BQ07699 218 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 NME3Q13232 169 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 NDUFA9Q16795 377 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 KBTBD12Q3ZCT8 623 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 SLC30A6Q6NXT4 461 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 CAVIN1Q6NZI2 390 aaKnown RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 PET117Q6UWS5 81 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 UNQ9165/PRO28630Q6UXU0 137 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 NTM-AS1Q6ZSK4 140 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 USP50Q70EL3 339 aaPredicted RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 YRDCQ86U90 279 aaKnown RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 BIVMQ86UB2 503 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 TRIM69Q86WT6 500 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 VSIG1Q86XK7 387 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 SVOPLQ8N434 492 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 NAT8LQ8N9F0 302 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 OR10G3Q8NGC4 313 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 OR9G1Q8NH87 305 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 WDR36Q8NI36 951 aaKnown RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 ACTRT1Q8TDG2 376 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 CD300LFQ8TDQ1 290 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 CELF6Q96J87 481 aaKnown RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 ZNF560Q96MR9 790 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 OR5B2Q96R09 309 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 CBWD1Q9BRT8 395 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 MLPHQ9BV36 600 aaPredicted RBP0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms