RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 LINC00696Q6ZRV3 163 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 TTC9Q92623 222 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 HPF1Q9NWY4 346 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 SSUH2Q9Y2M2 353 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 HEATR5AQ86XA9 2040 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 EML6Q6ZMW3 1958 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 C2orf72A6NCS6 295 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 KPNA4O00629 521 aaPredicted RBP16.85■□□□□ 0.29
SMPD1-208ENST00000533123 NDUFB5O43674 189 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 NGFRP08138 427 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 TSPAN31Q12999 210 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 TMED1Q13445 227 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 ZBED5Q49AG3 693 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 ABHD17BQ5VST6 288 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 C12orf73Q69YU5 71 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 PTCHD4Q6ZW05 846 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 PFN4Q8NHR9 129 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 ZNF559Q9BR84 538 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 GALNT9Q9HCQ5 603 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 C20orf141Q9NUB4 165 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 CHCHD2Q9Y6H1 151 aaPredicted RBP16.85■□□□□ 0.29
SMPD1-208ENST00000533123 CDC42EP2O14613 210 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 GSTM3P21266 225 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 CBLN3Q6UW01 205 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 OR8D4Q8NGM9 314 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 POLR2J2Q9GZM3 115 aaKnown RBP16.85■□□□□ 0.29
SMPD1-208ENST00000533123 GPR83Q9NYM4 423 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 CARD8Q9Y2G2 431 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 SNX5Q9Y5X3 404 aa16.85■□□□□ 0.29
SMPD1-208ENST00000533123 A0A0B4J2E0 115 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 A0A1B0GWA3 101 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 A0A1B0GX12 115 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 GTPBP1O00178 669 aaKnown RBP16.84■□□□□ 0.29
SMPD1-208ENST00000533123 TP53I11O14683 189 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 MAGEB3O15480 346 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 RRP8O43159 456 aaKnown RBP16.84■□□□□ 0.29
SMPD1-208ENST00000533123 KLF4O43474 513 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 OIP5O43482 229 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 MT-ND2P03891 347 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 PCMT1P22061 227 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 ADH7P40394 386 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 MAP2K4P45985 399 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 SOX8P57073 446 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 GINS1Q14691 196 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 MDGA2Q7Z553 956 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 CMIPQ8IY22 773 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 FNDC8Q8TC99 324 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 OIT3Q8WWZ8 545 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 ABTB1Q969K4 478 aaPredicted RBP16.84■□□□□ 0.29
SMPD1-208ENST00000533123 SH3YL1Q96HL8 342 aaPredicted RBP16.84■□□□□ 0.29
SMPD1-208ENST00000533123 TMEM27Q9HBJ8 222 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 KLRF1Q9NZS2 232 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 SLC35A3Q9Y2D2 325 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 KCNMB2Q9Y691 235 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 A0A1W2PQD3 144 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 C1QTNF9BB2RNN3 333 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 ADAM10O14672 748 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 GMFGO60234 142 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 C1QTNF9P0C862 333 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 UBL4AP11441 157 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 FUT1P19526 365 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 CASP3P42574 277 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 OC90Q02509 493 aaPredicted RBP16.84■□□□□ 0.29
SMPD1-208ENST00000533123 EMX1Q04741 257 aaPredicted RBP16.84■□□□□ 0.29
SMPD1-208ENST00000533123 PRAMEF20Q5VT98 475 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 AGAP7PQ5VUJ5 663 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 OR5M10Q6IEU7 315 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 ACSM5Q6NUN0 579 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 ZNF613Q6PF04 617 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 CYP4Z2PQ8N1L4 340 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 CADM2Q8N3J6 435 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 TOR1AIP2Q8NFQ8 470 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 DUSP19Q8WTR2 217 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 TMEM239Q8WW34 195 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 AGAP4Q96P64 663 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 METTL7AQ9H8H3 244 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 SELENONQ9NZV5 590 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 RAXQ9Y2V3 346 aa16.84■□□□□ 0.29
SMPD1-208ENST00000533123 PCNX3Q9H6A9 2034 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF264O43296 627 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 JUNBP17275 347 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-208ENST00000533123 FPR3P25089 353 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 GIPRP48546 466 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 MASP1P48740 699 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 CYB561P49447 251 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 MVKQ03426 396 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 CLEC12AQ5QGZ9 265 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 CLVS1Q8IUQ0 354 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-208ENST00000533123 FDCSPQ8NFU4 85 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 PPP1R14BQ96C90 147 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 TVP23BQ9NYZ1 205 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 PLA2G3Q9NZ20 509 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 PSORS1C1Q9UIG5 152 aa16.83■□□□□ 0.28
SMPD1-208ENST00000533123 MED19A0JLT2 244 aaPredicted RBP16.82■□□□□ 0.28
SMPD1-208ENST00000533123 HCRTR2O43614 444 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 RGS10O43665 173 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 CCL3P10147 92 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 PTGDSP41222 190 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 CDK5Q00535 292 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 TLE3Q04726 772 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms