RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 DPP10Q8N608 796 aa16.84■□□□□ 0.29
SSH3-209ENST00000532600 ANKFN1Q8N957 763 aa16.84■□□□□ 0.29
SSH3-209ENST00000532600 PSD2Q9BQI7 771 aa16.84■□□□□ 0.29
SSH3-209ENST00000532600 ACTR6Q9GZN1 396 aa16.84■□□□□ 0.29
SSH3-209ENST00000532600 IKZF5Q9H5V7 419 aa16.84■□□□□ 0.29
SSH3-209ENST00000532600 TIGARQ9NQ88 270 aa16.84■□□□□ 0.29
SSH3-209ENST00000532600 ACER3Q9NUN7 267 aa16.84■□□□□ 0.29
SSH3-209ENST00000532600 VAPAQ9P0L0 249 aa16.84■□□□□ 0.29
SSH3-209ENST00000532600 LEF1Q9UJU2 399 aaPredicted RBP16.84■□□□□ 0.29
SSH3-209ENST00000532600 ARL2BPQ9Y2Y0 163 aa16.84■□□□□ 0.29
SSH3-209ENST00000532600 NDUFAF1Q9Y375 327 aa16.84■□□□□ 0.29
SSH3-209ENST00000532600 WDR45Q9Y484 360 aa16.84■□□□□ 0.29
SSH3-209ENST00000532600 NIPBLQ6KC79 2804 aaeCLIP16.83■□□□□ 0.29
SSH3-209ENST00000532600 LOC100653049A0A140TA62 436 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 ZNF814B7Z6K7 855 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 SLC22A2O15244 555 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 KRT34O76011 436 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 PLAUP00749 431 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 PSMB1P20618 241 aaKnown RBP16.83■□□□□ 0.28
SSH3-209ENST00000532600 ADSLP30566 484 aaPredicted RBP16.83■□□□□ 0.28
SSH3-209ENST00000532600 KHKP50053 298 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 RAC3P60763 192 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 RNPS1Q15287 305 aaKnown RBP16.83■□□□□ 0.28
SSH3-209ENST00000532600 MAPK11Q15759 364 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 SYPL1Q16563 259 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 PLEKHM3Q6ZWE6 761 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 EIF3MQ7L2H7 374 aaKnown RBP16.83■□□□□ 0.28
SSH3-209ENST00000532600 ZNF619Q8N2I2 560 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 TRIML2Q8N7C3 387 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 POU5F2Q8N7G0 328 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 IGFBPL1Q8WX77 278 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 ST8SIA1Q92185 356 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 UBTD1Q9HAC8 227 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 TPT1P8Q9HAU6 139 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 POLE3Q9NRF9 147 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 GPR52Q9Y2T5 361 aa16.83■□□□□ 0.28
SSH3-209ENST00000532600 ANGPT2O15123 496 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 PRKD3O94806 890 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 ANP32DO95626 131 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 AGR2O95994 175 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 YES1P07947 543 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 CHRM4P08173 479 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 PABPC4LP0CB38 370 aaKnown RBP16.82■□□□□ 0.28
SSH3-209ENST00000532600 PPP3CBP16298 524 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 ATAD3BQ5T9A4 648 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 REP15Q6BDI9 236 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 GTF2IRD2BQ6EKJ0 949 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 C3orf33Q6P1S2 294 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 GTF2IRD2Q86UP8 949 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 S100PBPQ96BU1 408 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 OR5B2Q96R09 309 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 ZNF300Q96RE9 604 aaPredicted RBP16.82■□□□□ 0.28
SSH3-209ENST00000532600 PIP5K1AQ99755 562 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 CPPED1Q9BRF8 314 aaPredicted RBP16.82■□□□□ 0.28
SSH3-209ENST00000532600 SLC38A1Q9H2H9 487 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 BCO1Q9HAY6 547 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 GP6Q9HCN6 339 aa16.82■□□□□ 0.28
SSH3-209ENST00000532600 FXYD1O00168 92 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 CLIC1O00299 241 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 ETFAP13804 333 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 PGCP20142 388 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 SLC7A1P30825 629 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 NKX6-1P78426 367 aaPredicted RBP16.81■□□□□ 0.28
SSH3-209ENST00000532600 MERTKQ12866 999 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 SELPLGQ14242 412 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 TMEM201Q5SNT2 666 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 SEZ6L2Q6UXD5 910 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 DHDDSQ86SQ9 333 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 WFDC8Q8IUA0 241 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 ANKS4BQ8N8V4 417 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 OIT3Q8WWZ8 545 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 CNOT9Q92600 299 aaKnown RBP16.81■□□□□ 0.28
SSH3-209ENST00000532600 REXO5Q96IC2 774 aaKnown RBP16.81■□□□□ 0.28
SSH3-209ENST00000532600 TMEM204Q9BSN7 226 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 OR10A4Q9H209 315 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 CTPS2Q9NRF8 586 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 MRGBPQ9NV56 204 aa16.81■□□□□ 0.28
SSH3-209ENST00000532600 DSCAMO60469 2012 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 AP3D1O14617 1153 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 CYTIPO60759 359 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 KRT75O95678 551 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 NUDT7P0C024 238 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 COX4I1P13073 169 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 RYKP34925 604 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 DIO1P49895 249 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 KCNJ10P78508 379 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 NFYCQ13952 458 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 CYLC2Q14093 348 aaPredicted RBP16.8■□□□□ 0.28
SSH3-209ENST00000532600 CAPRIN1Q14444 709 aaKnown RBP16.8■□□□□ 0.28
SSH3-209ENST00000532600 GPAT3Q53EU6 434 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 RUNDC3AQ59EK9 446 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 BEX5Q5H9J7 111 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 TMPPEQ6ZT21 453 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 ATG4DQ86TL0 474 aaPredicted RBP16.8■□□□□ 0.28
SSH3-209ENST00000532600 STK32CQ86UX6 486 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 SLC43A2Q8N370 569 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 ZNF775Q96BV0 537 aaPredicted RBP16.8■□□□□ 0.28
SSH3-209ENST00000532600 RCN3Q96D15 328 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 PLPPR2Q96GM1 343 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 ARL5BQ96KC2 179 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms