RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 E7ESA3 106 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 TRAFD1O14545 582 aaPredicted RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 RAB29O14966 203 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 RBMXL2O75526 392 aaKnown RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 AP2A2O94973 939 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 CLPTM1O96005 669 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 TOMM40O96008 361 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 HPP00738 406 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 HLA-HP01893 362 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 CT62P0C5K7 136 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 DCTP40126 519 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 ID1P41134 155 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 DAP3P51398 398 aaKnown RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 INHBCP55103 352 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 XGP55808 180 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 CTAG1AP78358 180 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 CSNK1G2P78368 415 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 IRX3P78415 501 aaPredicted RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 MRPS22P82650 360 aaKnown RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 TMEM187Q14656 261 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 EZH2Q15910 746 aaKnown RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 MRPL23Q16540 153 aaKnown RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 CYP51A1Q16850 503 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 ISXQ2M1V0 245 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 PGGHGQ32M88 737 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 SLC22A6Q4U2R8 563 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 DMRTC1Q5HYR2 192 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 SPECC1LQ69YQ0 1117 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 C3P1Q6ZMU1 363 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 BHLHA15Q7RTS1 189 aaPredicted RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 DNAAF3Q8N9W5 541 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 OR52I1Q8NGK6 324 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 OR10G7Q8NGN6 311 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 OR2T11Q8NH01 316 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 PLPPR1Q8TBJ4 325 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 TCTEX1D2Q8WW35 142 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 HTR3CQ8WXA8 447 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 TOMM40LQ969M1 308 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 C11orf52Q96A22 123 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 CCDC124Q96CT7 223 aaKnown RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 DNAJA3Q96EY1 480 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 ZBED6CLQ96FA7 236 aaPredicted RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 RBM4BQ9BQ04 359 aaKnown RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 RBM4Q9BWF3 364 aaKnown RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 MFFQ9GZY8 342 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 ELL3Q9HB65 397 aaPredicted RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 PTTG3PQ9NZH4 202 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 THYN1Q9P016 225 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 MYEF2Q9P2K5 600 aaKnown RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 MMP24Q9Y5R2 645 aa3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 V9GYY5 206 aaPredicted RBP3.65□□□□□ -1.83
AC055878.1-201ENST00000531858 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 PP2D1A8MPX8 630 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 ZNF99A8MXY4 864 aaPredicted RBP3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 IDSB3KWA1 339 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 B4DXG7 233 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 TRDCB7Z8K6 153 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 E9PQ18 207 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 DYNC1I1O14576 645 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 EIF3HO15372 352 aaKnown RBP eCLIP3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 RGS16O15492 202 aaPredicted RBP3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 SOX15O60248 233 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 FRAT2O75474 233 aaPredicted RBP3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 SMC2O95347 1197 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 LGALS2P05162 132 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 H2AFZP0C0S5 128 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 SDC1P18827 310 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 SERPINA2P20848 420 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 ARRB1P49407 418 aaPredicted RBP3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 EFNA3P52797 238 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 ART1P52961 327 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 PSMD4P55036 377 aaKnown RBP3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 RPL8P62917 257 aaKnown RBP3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 LRRC63Q05C16 580 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 CCDC173Q0VFZ6 552 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 VGLL4Q14135 290 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 MLF2Q15773 248 aaPredicted RBP3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 ECSCRQ19T08 205 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 HLA-BQ31612 363 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 KIAA1644Q3SXP7 199 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 TIGITQ495A1 244 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 PCSK4Q6UW60 755 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 APOOLQ6UXV4 268 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 ERICH1Q86X53 443 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 RNF130Q86XS8 419 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 HPS6Q86YV9 775 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 CCDC65Q8IXS2 484 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 LINC01561Q8N1V8 128 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 MTURNQ8N3F0 131 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 TPRX1Q8N7U7 411 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 ZNF781Q8N8C0 355 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 FBXO36Q8NEA4 188 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 OR4A15Q8NGL6 344 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 FAM110BQ8TC76 370 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 SECTM1Q8WVN6 248 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 KIFAP3Q92845 792 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 MRGPRFQ96AM1 343 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 FAM131CQ96AQ9 280 aa3.64□□□□□ -1.83
AC055878.1-201ENST00000531858 ZNF317Q96PQ6 595 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms