RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 BRMS1LQ5PSV4 323 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 HES5Q5TA89 166 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ATP1A1-AS1Q5TC04 95 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 SEL1L2Q5TEA6 688 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ATF7IP2Q5U623 682 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 RAET1LQ5VY80 246 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ABHD12BQ7Z5M8 362 aaPredicted RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ADAMTSL2Q86TH1 951 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CARM1Q86X55 608 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ECHDC2Q86YB7 292 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 GID4Q8IVV7 300 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 SIAH3Q8IW03 269 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 LRRC8AQ8IWT6 810 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 THEM5Q8N1Q8 247 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 RYBPQ8N488 228 aaPredicted RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 STKLD1Q8NE28 680 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 OR56B1Q8NGI3 324 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 OR52B4Q8NGK2 314 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 OR13F1Q8NGS4 319 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 OR13C9Q8NGT0 318 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 GPX8Q8TED1 209 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 SETD7Q8WTS6 366 aaKnown RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 U2AF1L4Q8WU68 220 aaKnown RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 PROX1Q92786 737 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 MRGPRFQ96AM1 343 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CCDC127Q96BQ5 260 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF799Q96GE5 643 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF578Q96N58 590 aaPredicted RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 BTBD9Q96Q07 612 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CITED1Q99966 193 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 FAM213AQ9BRX8 229 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 KATNB1Q9BVA0 655 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 OR51B6Q9H340 312 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 GOLPH3Q9H4A6 298 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 FBXO44Q9H4M3 255 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ZSCAN16Q9H4T2 348 aaPredicted RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 MINDY3Q9H8M7 445 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 MOB1AQ9H8S9 216 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 SP140LQ9H930 580 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 MARCH7Q9H992 704 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 LMAN1LQ9HAT1 526 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 VCX3AQ9NNX9 186 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF302Q9NR11 478 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 DIABLOQ9NR28 239 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 TREX1Q9NSU2 369 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 PLEK2Q9NYT0 353 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 GCNT4Q9P109 453 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CYB5R1Q9UHQ9 305 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 CRLS1Q9UJA2 301 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF229Q9UJW7 825 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 GGA2Q9UJY4 613 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 STOML2Q9UJZ1 356 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 PILRAQ9UKJ1 303 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 EIF3LQ9Y262 564 aaKnown RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 PRG3Q9Y2Y8 225 aaPredicted RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 MYH14Q7Z406 1995 aaKnown RBP2.87□□□□□ -1.95
PTPRK-220ENST00000531466 TNRQ92752 1358 aa2.87□□□□□ -1.95
PTPRK-220ENST00000531466 TRAV24A0A0B4J272 114 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 KLF18A0A0U1RQI7 1052 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 A0A1B0GUH1 482 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 IQCMA0A1B0GVH7 501 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 GNG14A0A1W2PPG7 69 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 A8MUA0 341 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 TMEM114B3SHH9 223 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 ERVV-1B6SEH8 477 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 F8VVB4 439 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 F8VWA3 439 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 LAD1O00515 517 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 TOR1AO14656 332 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 CHADO15335 359 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 STX7O15400 261 aaKnown RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 GPAA1O43292 621 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 RNF13O43567 381 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 LCMT2O60294 686 aaKnown RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 DFNA5O60443 496 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SCN2BO60939 215 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 CSDE1O75534 798 aaKnown RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SERPIND1P05546 499 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 GNAO1P09471 354 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 ANXA4P09525 319 aaPredicted RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 GSTT2P0CG29 244 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 GSTT2BP0CG30 244 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 CCL2P13500 99 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 CCNB1P14635 433 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 MYL6BP14649 208 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 NQO2P16083 231 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SERPINB1P30740 379 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 GPR183P32249 361 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 PCK1P35558 622 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 ACTR1BP42025 376 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SLC1A3P43003 542 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 SLC1A1P43005 524 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 MAGEA6P43360 314 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 ALDH3B2P48448 385 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 CDC34P49427 236 aaPredicted RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 CCR4P51679 360 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 AP3S2P59780 193 aa2.86□□□□□ -1.95
PTPRK-220ENST00000531466 ABCE1P61221 599 aaKnown RBP2.86□□□□□ -1.95
PTPRK-220ENST00000531466 RAB11AP62491 216 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms