RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 FAM228BP0C875 321 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 IGHV4-38-2P0DP08 117 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 TCN1P20061 433 aaPredicted RBP6.31□□□□□ -1.4
POLB-216ENST00000530566 LMO1P25800 156 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 SFTPDP35247 375 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 THBS4P35443 961 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 RGS4P49798 205 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 PNLIPRP2P54317 469 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 PRPS1P60891 318 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 MRPS22P82650 360 aaKnown RBP6.31□□□□□ -1.4
POLB-216ENST00000530566 MRPS11P82912 194 aaKnown RBP6.31□□□□□ -1.4
POLB-216ENST00000530566 EXOSC7Q15024 291 aaKnown RBP6.31□□□□□ -1.4
POLB-216ENST00000530566 PCID2Q5JVF3 399 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 OTUD3Q5T2D3 398 aaPredicted RBP6.31□□□□□ -1.4
POLB-216ENST00000530566 KLHL24Q6TFL4 600 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 Q6YL49 198 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 BBS12Q6ZW61 710 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 GALNT5Q7Z7M9 940 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 SAMD14Q8IZD0 417 aaPredicted RBP6.31□□□□□ -1.4
POLB-216ENST00000530566 CNPY4Q8N129 248 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 C17orf78Q8N4C9 275 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 CDYL2Q8N8U2 506 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 OR4F15Q8NGB8 312 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 ST7LQ8TDW4 575 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 RNF138Q8WVD3 245 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 ST8SIA2Q92186 375 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 FAM118BQ9BPY3 351 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 PSD2Q9BQI7 771 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 ANP32EQ9BTT0 268 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 KATNB1Q9BVA0 655 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 SRXN1Q9BYN0 137 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 PITHD1Q9GZP4 211 aaPredicted RBP6.31□□□□□ -1.4
POLB-216ENST00000530566 EHD1Q9H4M9 534 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 ZNF442Q9H7R0 627 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 CXorf36Q9H7Y0 433 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 NT5DC2Q9H857 520 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 WDR41Q9HAD4 459 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 SLC17A5Q9NRA2 495 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 TREX1Q9NSU2 369 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 MED16Q9Y2X0 877 aa6.31□□□□□ -1.4
POLB-216ENST00000530566 IGHV3-15A0A0B4J1V0 119 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 IGHV1-18A0A0C4DH31 117 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 A0A1W2PS29 197 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 ERI2A8K979 691 aaKnown RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 M0R233 179 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 SAP18O00422 153 aaKnown RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 CLGNO14967 610 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 GPR137BO60478 399 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 SH3BGRLO75368 114 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 FOXH1O75593 365 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 ZNF189O75820 626 aaPredicted RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 ABHD16AO95870 558 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 NR2F6P10588 404 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 OGNP20774 298 aaKnown RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 S1PR1P21453 382 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 PIK3R1P27986 724 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 NMBRP28336 390 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 GRIA1P42261 906 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 CLK3P49761 638 aaKnown RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 NAP1L1P55209 391 aaKnown RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 KRTAP10-11P60412 298 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 POU3F1Q03052 451 aaPredicted RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 TMEM35AQ53FP2 167 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 C1QTNF12Q5T7M4 302 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 OR4C11Q6IEV9 310 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 CENPUQ71F23 418 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 ZNF771Q7L3S4 317 aaPredicted RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 GTPBP8Q8N3Z3 284 aaPredicted RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 C11orf44Q8N8P7 122 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 FAM71DQ8N9W8 422 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 ZSCAN4Q8NAM6 433 aaPredicted RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 NUP37Q8NFH4 326 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 EFHD2Q96C19 240 aaPredicted RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 RNF145Q96MT1 663 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 SLC38A2Q96QD8 506 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 ZNF300Q96RE9 604 aaPredicted RBP6.3□□□□□ -1.4
POLB-216ENST00000530566 PRDM13Q9H4Q3 707 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 C16orf95Q9H693 158 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 NOX4Q9NPH5 578 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 MMP26Q9NRE1 261 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 PRODH2Q9UF12 536 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 PLLPQ9Y342 182 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 HYOU1Q9Y4L1 999 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 POMT1Q9Y6A1 747 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 PCNX3Q9H6A9 2034 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 KIAA1109Q2LD37 5005 aa6.3□□□□□ -1.4
POLB-216ENST00000530566 UBR4Q5T4S7 5183 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 A0A087WZY1 265 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 ZNF816-ZNF321PA0A0X1KG74 233 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 CTAGE9A4FU28 777 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 E7EVH7 732 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 SYNGR3O43761 229 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 SPOPO43791 374 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 RP2O75695 350 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 SLC1A1P43005 524 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 MANFP55145 182 aaKnown RBP6.29□□□□□ -1.4
POLB-216ENST00000530566 CRADDP78560 199 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 CPTPQ5TA50 214 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 C9orf135Q5VTT2 229 aa6.29□□□□□ -1.4
POLB-216ENST00000530566 Q6ZSV7 163 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms