RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 EXTL1Q92935 676 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 ADIPOR1Q96A54 375 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 TMIGD2Q96BF3 282 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 NMD3Q96D46 503 aaKnown RBP7.52□□□□□ -1.21
CMTM1-214ENST00000530141 VMP1Q96GC9 406 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 FAM46AQ96IP4 442 aaKnown RBP7.52□□□□□ -1.21
CMTM1-214ENST00000530141 GAL3ST4Q96RP7 486 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 LPAR4Q99677 370 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 NUDT9Q9BW91 350 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 TSSK6Q9BXA6 273 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 CDCA4Q9BXL8 241 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 STRADBQ9C0K7 418 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 WWTR1Q9GZV5 400 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 LAT2Q9GZY6 243 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 FN3KQ9H479 309 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 GPN2Q9H9Y4 310 aaPredicted RBP7.52□□□□□ -1.21
CMTM1-214ENST00000530141 ACOT13Q9NPJ3 140 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 FBXO8Q9NRD0 319 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 FBXO34Q9NWN3 711 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 IL20Q9NYY1 176 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 H2AFY2Q9P0M6 372 aaPredicted RBP7.52□□□□□ -1.21
CMTM1-214ENST00000530141 KCNE5Q9UJ90 142 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 ZNF223Q9UK11 482 aaPredicted RBP7.52□□□□□ -1.21
CMTM1-214ENST00000530141 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.52□□□□□ -1.21
CMTM1-214ENST00000530141 PPIEQ9UNP9 301 aaKnown RBP7.52□□□□□ -1.21
CMTM1-214ENST00000530141 DTX4Q9Y2E6 619 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 MYO9AB2RTY4 2548 aa7.52□□□□□ -1.21
CMTM1-214ENST00000530141 SCN3AQ9NY46 2000 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 RELNP78509 3460 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 CENPVL1A0A0U1RR11 272 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 A0A1B0GWA3 101 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 CLDN24A6NM45 220 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 HRKO00198 91 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 SLC22A1O15245 554 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 PRODHO43272 600 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 ZNF264O43296 627 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 CSO75390 466 aaKnown RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 REM1O75628 298 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 FADS2O95864 444 aaKnown RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 IFNGP01579 166 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 IGKV1D-16P01601 117 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 TP53P04637 393 aaPredicted RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 HTR1AP08908 422 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 NAGAP17050 411 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 PSMB9P28065 219 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 SLC6A6P31641 620 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 TMED10P49755 219 aaKnown RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 HOXC5Q00444 222 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 RAB40BQ12829 278 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 LSAMPQ13449 338 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 C1DQ13901 141 aaKnown RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 TIMM50Q3ZCQ8 353 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 ANKDD1AQ495B1 522 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 PRAMEF17Q5VTA0 474 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 PLAG1Q6DJT9 500 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 WBP2NLQ6ICG8 309 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 CCDC81Q6ZN84 652 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 NUP54Q7Z3B4 507 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 TMPRSS9Q7Z410 1059 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 CPEB2Q7Z5Q1 589 aaKnown RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 ANKRD37Q7Z713 158 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 ZAR1Q86SH2 424 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 GID4Q8IVV7 300 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 CCDC103Q8IW40 242 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 CADM2Q8N3J6 435 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 TCEANCQ8N8B7 351 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 ZSCAN1Q8NBB4 408 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 FAM71CQ8NEG0 241 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 B3GNT7Q8NFL0 401 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 OR4N2Q8NGD1 307 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 OR9Q1Q8NGQ5 310 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 FANK1Q8TC84 345 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 PHOSPHO1Q8TCT1 267 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 FAR1Q8WVX9 515 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 CNOT9Q92600 299 aaKnown RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 C12orf43Q96C57 262 aaKnown RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 TMCO6Q96DC7 493 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 BPIFA2Q96DR5 249 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 SGTBQ96EQ0 304 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 WBP1Q96G27 269 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 TMEM80Q96HE8 168 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 SIGLEC11Q96RL6 698 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 CMKLR1Q99788 373 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 PRSS27Q9BQR3 290 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 CRB3Q9BUF7 120 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 MND1Q9BWT6 205 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 LHPPQ9H008 270 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 NXF5Q9H1B4 397 aaKnown RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 TIMMDC1Q9NPL8 285 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 MRPS18AQ9NVS2 196 aaKnown RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 PAK1IP1Q9NWT1 392 aaPredicted RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 CTSFQ9UBX1 484 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 ERGIC3Q9Y282 383 aa7.51□□□□□ -1.21
CMTM1-214ENST00000530141 EXOSC1Q9Y3B2 195 aaKnown RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 SPTAN1Q13813 2472 aaKnown RBP7.51□□□□□ -1.21
CMTM1-214ENST00000530141 UTP20O75691 2785 aaKnown RBP7.5□□□□□ -1.21
CMTM1-214ENST00000530141 A0A087WUJ7 227 aa7.5□□□□□ -1.21
CMTM1-214ENST00000530141 OR6C70A6NIJ9 312 aa7.5□□□□□ -1.21
CMTM1-214ENST00000530141 ELOA3DA6NLF2 546 aaPredicted RBP7.5□□□□□ -1.21
CMTM1-214ENST00000530141 KDM4EB2RXH2 506 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms