RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SATB2Q9UPW6 733 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 CMAHPQ9Y471 501 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 AGAP5A6NIR3 686 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 WISP3O95389 354 aaPredicted RBP13.93□□□□□ -0.18
USP47-207ENST00000527733 UNQ6126/PRO20091Q6UXV3 157 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 LRRC46Q96FV0 321 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 NIPSNAP1Q9BPW8 284 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 TVP23AA6NH52 213 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 DDAH2O95865 285 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 HOXD12P35452 270 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 AQP2P41181 271 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 SLC6A19Q695T7 634 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 GDPGP1Q6ZNW5 385 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 B3GNT8Q7Z7M8 397 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 SNIP1Q8TAD8 396 aaKnown RBP13.92□□□□□ -0.18
USP47-207ENST00000527733 DUS3LQ96G46 650 aaKnown RBP13.92□□□□□ -0.18
USP47-207ENST00000527733 A8MVM7 634 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 ORC5O43913 435 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 EFEMP2O95967 443 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 IGHG1P01857 330 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 ERCC1P07992 297 aaPredicted RBP13.92□□□□□ -0.18
USP47-207ENST00000527733 DLSTP36957 453 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 ZXDAP98168 799 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 SMN1Q16637 294 aaKnown RBP13.92□□□□□ -0.18
USP47-207ENST00000527733 TMEM201Q5SNT2 666 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 SAMD12Q8N8I0 201 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 TMEM41AQ96HV5 264 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 ZNF160Q9HCG1 818 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 MED11Q9P086 117 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 ING4Q9UNL4 249 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 FARSAQ9Y285 508 aaKnown RBP13.92□□□□□ -0.18
USP47-207ENST00000527733 MYOFQ9NZM1 2061 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 CCDC187A0A096LP49 1063 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 ANKDD1AQ495B1 522 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 TP53I3Q53FA7 332 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 NHSL2Q5HYW2 709 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 FCRL6Q6DN72 434 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 SNX29P2Q8IUI4 249 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 OR2I1PQ8NGU4 316 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 ACER3Q9NUN7 267 aa13.92□□□□□ -0.18
USP47-207ENST00000527733 J3QRK9 145 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 DLGAP1O14490 977 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 SLC16A6O15403 523 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 RFPL3O75679 317 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 ACP2P11117 423 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 LTBRP36941 435 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 SPEM2Q0P670 501 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 PGBD2Q6P3X8 592 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 GRINAQ7Z429 371 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 TOMM5Q8N4H5 51 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 EMC3Q9P0I2 261 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 NUP214P35658 2090 aaPredicted RBP13.91□□□□□ -0.18
USP47-207ENST00000527733 TEX13CA0A0J9YWL9 993 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 CSO75390 466 aaKnown RBP13.91□□□□□ -0.18
USP47-207ENST00000527733 TNFSF15O95150 251 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 C21orf33P30042 268 aaPredicted RBP13.91□□□□□ -0.18
USP47-207ENST00000527733 STARD6P59095 220 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 EIF2B1Q14232 305 aaKnown RBP13.91□□□□□ -0.18
USP47-207ENST00000527733 IL11RAQ14626 422 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 LRRN1Q6UXK5 716 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 ASB18Q6ZVZ8 466 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 TMPRSS12Q86WS5 348 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 FTMTQ8N4E7 242 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 TMEM178AQ8NBL3 297 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 NANOS1Q8WY41 292 aaKnown RBP13.91□□□□□ -0.18
USP47-207ENST00000527733 THOC3Q96J01 351 aaKnown RBP13.91□□□□□ -0.18
USP47-207ENST00000527733 BCL7BQ9BQE9 202 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 SEMA4GQ9NTN9 838 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 SLC7A11Q9UPY5 501 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 A0A1B0GTQ1 180 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 OR2W5A6NFC9 320 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 ATE1O95260 518 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 EML2O95834 649 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 FOLR1P15328 257 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 MMP11P24347 488 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 GRK5P34947 590 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 FOXK1P85037 733 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 MALLQ13021 153 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 BCL2L15Q5TBC7 163 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 KDM4DQ6B0I6 523 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 AMER3Q8N944 861 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 OR5W2Q8NH69 310 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 OR5AK2Q8NH90 309 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 SETD6Q8TBK2 473 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 TNFAIP8L1Q8WVP5 186 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 GGHQ92820 318 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 NXF5Q9H1B4 397 aaKnown RBP13.91□□□□□ -0.18
USP47-207ENST00000527733 INPP5EQ9NRR6 644 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 FTCDNL1E5RQL4 147 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 NRG2O14511 850 aaPredicted RBP13.91□□□□□ -0.18
USP47-207ENST00000527733 HOXB3P14651 431 aaPredicted RBP13.91□□□□□ -0.18
USP47-207ENST00000527733 P2RX1P51575 399 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 PPP1CAP62136 330 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 NCS1P62166 190 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 SLC35A1P78382 337 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 GALNTL5Q7Z4T8 443 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 OR1L3Q8NH93 324 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 UBAP1Q9NZ09 502 aa13.91□□□□□ -0.18
USP47-207ENST00000527733 ATP1B1P05026 303 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 WNT3P56703 355 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms