RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ZMIZ1Q9ULJ6 1067 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 DNAH14Q0VDD8 3507 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 TP53BP1Q12888 1972 aaPredicted RBP14.1□□□□□ -0.15
USH1C-207ENST00000527720 NCR1O76036 304 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 SLC2A2P11168 524 aaPredicted RBP14.1□□□□□ -0.15
USH1C-207ENST00000527720 POU3F3P20264 500 aaPredicted RBP14.1□□□□□ -0.15
USH1C-207ENST00000527720 PGDP52209 483 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 SRSF5Q13243 272 aaKnown RBP14.1□□□□□ -0.15
USH1C-207ENST00000527720 GRM7Q14831 915 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 KCNJ8Q15842 424 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 FAAH2Q6GMR7 532 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 DPY19L2P2Q6ZN68 376 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 NCCRP1Q6ZVX7 275 aaPredicted RBP14.1□□□□□ -0.15
USH1C-207ENST00000527720 SLITRK4Q8IW52 837 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 Q8N402 240 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 MS4A15Q8N5U1 240 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 CYB561A3Q8NBI2 242 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 C4orf36Q96KX1 117 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 UBL7Q96S82 380 aaPredicted RBP14.1□□□□□ -0.15
USH1C-207ENST00000527720 TPSD1Q9BZJ3 242 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 LMAN1LQ9HAT1 526 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 C2orf42Q9NWW7 574 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 SOHLH2Q9NX45 425 aa14.1□□□□□ -0.15
USH1C-207ENST00000527720 NUP210LQ5VU65 1888 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 SYNDIG1LA6NDD5 238 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 IDH3BO43837 385 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 SC5DO75845 299 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 CLPSP04118 112 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 IFNA16P05015 189 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 MRPL3P09001 348 aaKnown RBP14.09□□□□□ -0.15
USH1C-207ENST00000527720 CLUP10909 449 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 EPHA4P54764 986 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 ACTA2P62736 377 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 RACK1P63244 317 aaKnown RBP14.09□□□□□ -0.15
USH1C-207ENST00000527720 ACTG2P63267 376 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 LGALS3BPQ08380 585 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 KLHL26Q53HC5 615 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 TRIQKQ629K1 86 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 ARL9Q6T311 187 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 TEX19Q8NA77 164 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 ZNF527Q8NB42 609 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 C19orf18Q8NEA5 215 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 FAM71CQ8NEG0 241 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 OR52E2Q8NGJ4 325 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 OR4C3Q8NH37 302 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 C11orf54Q9H0W9 315 aaPredicted RBP14.09□□□□□ -0.15
USH1C-207ENST00000527720 ENAMQ9NRM1 1142 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 ZNF337Q9Y3M9 751 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 MPDZO75970 2070 aa14.09□□□□□ -0.15
USH1C-207ENST00000527720 ARPC3O15145 178 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 MBTPS2O43462 519 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 OR2T7P0C7T2 308 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 MYL9P24844 172 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 APEX1P27695 318 aaKnown RBP14.08□□□□□ -0.15
USH1C-207ENST00000527720 CD1CP29017 333 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 NRG3P56975 720 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 DAB2P98082 770 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 SMAD4Q13485 552 aaKnown RBP14.08□□□□□ -0.15
USH1C-207ENST00000527720 TDGQ13569 410 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 IL18Q14116 193 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 DMKNQ6E0U4 476 aaPredicted RBP14.08□□□□□ -0.15
USH1C-207ENST00000527720 OGFOD3Q6PK18 319 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 PXKQ7Z7A4 578 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 SYS1Q8N2H4 156 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 FAM98AQ8NCA5 519 aaKnown RBP14.08□□□□□ -0.15
USH1C-207ENST00000527720 C7orf57Q8NEG2 295 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 CADM4Q8NFZ8 388 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 OR2T27Q8NH04 317 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 C3orf49Q96BT1 292 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 ZDHHC12Q96GR4 267 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 ZC3HAV1LQ96H79 300 aaKnown RBP14.08□□□□□ -0.15
USH1C-207ENST00000527720 SENP5Q96HI0 755 aaPredicted RBP14.08□□□□□ -0.15
USH1C-207ENST00000527720 PHF7Q9BWX1 381 aaPredicted RBP14.08□□□□□ -0.15
USH1C-207ENST00000527720 FBXL4Q9UKA2 621 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 MMACHCQ9Y4U1 282 aa14.08□□□□□ -0.15
USH1C-207ENST00000527720 IGHV5-51A0A0C4DH38 117 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 MEIOCA2RUB1 952 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 J3QLW9 94 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 PLA2G10O15496 165 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 SERPINA3P01011 423 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 KRT8P05787 483 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 HIST1H1CP16403 213 aaKnown RBP14.08□□□□□ -0.16
USH1C-207ENST00000527720 ZNF19P17023 458 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 PRPS1P60891 318 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 SLC35D3Q5M8T2 416 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 RSBN1Q5VWQ0 802 aaPredicted RBP14.08□□□□□ -0.16
USH1C-207ENST00000527720 PAMR1Q6UXH9 720 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 OR6F1Q8NGZ6 308 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 ABHD4Q8TB40 342 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 PGLYRP3Q96LB9 341 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 TGM7Q96PF1 710 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 GPX7Q96SL4 187 aaPredicted RBP14.08□□□□□ -0.16
USH1C-207ENST00000527720 CNN2Q99439 309 aaKnown RBP14.08□□□□□ -0.16
USH1C-207ENST00000527720 TTYH2Q9BSA4 534 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 EXOSC3Q9NQT5 275 aaKnown RBP14.08□□□□□ -0.16
USH1C-207ENST00000527720 UBQLN4Q9NRR5 601 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 ZNF221Q9UK13 617 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 GMEB2Q9UKD1 530 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 IER3IP1Q9Y5U9 82 aa14.08□□□□□ -0.16
USH1C-207ENST00000527720 C17orf105B2RV13 164 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms