RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CLEC18BQ6UXF7 455 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 C3P1Q6ZMU1 363 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 PIWIL3Q7Z3Z3 882 aaKnown RBP9.67□□□□□ -0.86
NEDD8-205ENST00000527046 GDF7Q7Z4P5 450 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 CD163Q86VB7 1156 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 NKAIN4Q8IVV8 208 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 ADGRG5Q8IZF4 528 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 CLEC18CQ8NCF0 446 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 PROX1Q92786 737 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 SLCO4A1Q96BD0 722 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 CCDC124Q96CT7 223 aaKnown RBP9.67□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF300Q96RE9 604 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-205ENST00000527046 PTDSS2Q9BVG9 487 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 SRXN1Q9BYN0 137 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 MMADHCQ9H3L0 296 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-205ENST00000527046 MUC13Q9H3R2 512 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 EXO5Q9H790 373 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 C12orf10Q9HB07 376 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 KLHL28Q9NXS3 571 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 CLCF1Q9UBD9 225 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 CHRNA9Q9UGM1 479 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 RIMS3Q9UJD0 308 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 RPS6KA6Q9UK32 745 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 PRRC2CQ9Y520 2896 aaKnown RBP9.67□□□□□ -0.86
NEDD8-205ENST00000527046 MYO7BQ6PIF6 2116 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 MED12LQ86YW9 2145 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 BAHCC1Q9P281 2608 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 EIF4E1BA6NMX2 242 aaKnown RBP9.66□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF814B7Z6K7 855 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 FTCDNL1E5RQL4 147 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 TNFSF11O14788 317 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF208O43345 1280 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 DIRAS1O95057 198 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 TGM6O95932 706 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 TPOP07202 933 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 RNF224P0DH78 156 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 MAGEA2P43356 314 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 HTR3AP46098 478 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 H3F3AP84243 136 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 KCNC4Q03721 635 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 SRYQ05066 204 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 SELENBP1Q13228 472 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 CCNIQ14094 377 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 ACSF3Q4G176 576 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-205ENST00000527046 SYT14P1Q58G82 188 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 P3H2Q8IVL5 708 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 UBQLNLQ8IYU4 475 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 PIK3C3Q8NEB9 887 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 ATP6V1C2Q8NEY4 427 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 DNAJA4Q8WW22 397 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-205ENST00000527046 OSTF1Q92882 214 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 KTI12Q96EK9 354 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-205ENST00000527046 DNAJA3Q96EY1 480 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 DHRS1Q96LJ7 313 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 KLHL15Q96M94 604 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 POTEKPQ9BYX7 375 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 TMEM27Q9HBJ8 222 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 IL1RAPQ9NPH3 570 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 MEPEQ9NQ76 525 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-205ENST00000527046 RHCGQ9UBD6 479 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 ING1Q9UK53 422 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-205ENST00000527046 SAMD4AQ9UPU9 718 aaKnown RBP9.66□□□□□ -0.86
NEDD8-205ENST00000527046 SLC9A8Q9Y2E8 581 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 ENPP4Q9Y6X5 453 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 V9GYQ6 96 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 NCOA6Q14686 2063 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-205ENST00000527046 HIVEP3Q5T1R4 2406 aa9.66□□□□□ -0.86
NEDD8-205ENST00000527046 TRAPPC13A5PLN9 417 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 WIPF3A6NGB9 483 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 AQP12BA6NM10 295 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 CLCA1A8K7I4 914 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 hCG_2039718K7EN88 272 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 CHP2O43745 196 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 CXCL13O43927 109 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 RAMP1O60894 148 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 AQP8O94778 261 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 OR5F1O95221 314 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 GLI4P10075 376 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 ABOP16442 354 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 POU3F2P20265 443 aaPredicted RBP9.65□□□□□ -0.86
NEDD8-205ENST00000527046 ACVR2AP27037 513 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 CEACAM8P31997 349 aaPredicted RBP9.65□□□□□ -0.86
NEDD8-205ENST00000527046 SFTPDP35247 375 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 LIMS1P48059 325 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 P2RY4P51582 365 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 AGFG1P52594 562 aaKnown RBP9.65□□□□□ -0.86
NEDD8-205ENST00000527046 CDSNQ15517 529 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 ALG10BQ5I7T1 473 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 WLSQ5T9L3 541 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF585AQ6P3V2 769 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 NHLRC1Q6VVB1 395 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 DEF8Q6ZN54 512 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 TMPPEQ6ZT21 453 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 ESPNLQ6ZVH7 1005 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 FKBP9P1Q75LS8 142 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 RANBP3LQ86VV4 465 aaPredicted RBP9.65□□□□□ -0.86
NEDD8-205ENST00000527046 AQP12AQ8IXF9 295 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 NAXEQ8NCW5 288 aa9.65□□□□□ -0.86
NEDD8-205ENST00000527046 PAPD5Q8NDF8 572 aaKnown RBP9.65□□□□□ -0.86
NEDD8-205ENST00000527046 OR10D3Q8NH80 312 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms