RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 IDH2P48735 452 aaKnown RBP17.06■□□□□ 0.32
PKP3-204ENST00000526971 CDK6Q00534 326 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 SORDQ00796 357 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 RNF220Q5VTB9 566 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 FBXW10Q5XX13 1052 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 GRINAQ7Z429 371 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 BIVMQ86UB2 503 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 ZNF440Q8IYI8 595 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 NFKBIDQ8NI38 313 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 CCDC106Q9BWC9 280 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 SPATA9Q9BWV2 254 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 PRRG4Q9BZD6 226 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 PIGMQ9H3S5 423 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 TIGARQ9NQ88 270 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 SERINC1Q9NRX5 453 aa17.06■□□□□ 0.32
PKP3-204ENST00000526971 ZANQ9Y493 2812 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 FAAHO00519 579 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 DYNC1I1O14576 645 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 ETS2P15036 469 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 CD53P19397 219 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 APOBEC1P41238 236 aaKnown RBP17.05■□□□□ 0.32
PKP3-204ENST00000526971 EPS8Q12929 822 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 MAPRE2Q15555 327 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 ADRM1Q16186 407 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 COQ5Q5HYK3 327 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 REEP3Q6NUK4 255 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 PPP4R4Q6NUP7 873 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 C3orf33Q6P1S2 294 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 KIF18BQ86Y91 864 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 CLIP4Q8N3C7 705 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 C18orf12Q96KH6 178 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 ARMC7Q9H6L4 198 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 COQ10BQ9H8M1 238 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 PRDM4Q9UKN5 801 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 PACSIN3Q9UKS6 424 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 CHST2Q9Y4C5 530 aa17.05■□□□□ 0.32
PKP3-204ENST00000526971 SLC22A2O15244 555 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 PABPC4LP0CB38 370 aaKnown RBP17.04■□□□□ 0.32
PKP3-204ENST00000526971 UQCRBP14927 111 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 SLC7A1P30825 629 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 KIR2DL2P43627 348 aaPredicted RBP17.04■□□□□ 0.32
PKP3-204ENST00000526971 HTR3AP46098 478 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 SEC24CP53992 1094 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 MTPNP58546 118 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 SCARB2Q14108 478 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 SELPLGQ14242 412 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 CAPRIN1Q14444 709 aaKnown RBP17.04■□□□□ 0.32
PKP3-204ENST00000526971 GUSBP1Q15486 140 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 ZNF311Q5JNZ3 666 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 CNEP1R1Q8N9A8 125 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 STARD4Q96DR4 205 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 SRXN1Q9BYN0 137 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 CTPS2Q9NRF8 586 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 CAPN7Q9Y6W3 813 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 HEATR5AQ86XA9 2040 aa17.04■□□□□ 0.32
PKP3-204ENST00000526971 LOC100653049A0A140TA62 436 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 BBIP1A8MTZ0 92 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 KRT34O76011 436 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 INHBBP09529 407 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 GKN3PP0CG01 181 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 SLC6A2P23975 617 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 ACAA2P42765 397 aaKnown RBP17.03■□□□□ 0.32
PKP3-204ENST00000526971 SLC1A3P43003 542 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 CYLC2Q14093 348 aaPredicted RBP17.03■□□□□ 0.32
PKP3-204ENST00000526971 ZNF239Q16600 458 aaKnown RBP17.03■□□□□ 0.32
PKP3-204ENST00000526971 TRMT5Q32P41 509 aaKnown RBP17.03■□□□□ 0.32
PKP3-204ENST00000526971 ZNF550Q7Z398 422 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 SPATA21Q7Z572 469 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 BTLAQ7Z6A9 289 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 CXorf67Q86X51 503 aaPredicted RBP17.03■□□□□ 0.32
PKP3-204ENST00000526971 SNX32Q86XE0 403 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 ADGRG3Q86Y34 549 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 KRT73Q86Y46 540 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 SLC25A43Q8WUT9 341 aaPredicted RBP17.03■□□□□ 0.32
PKP3-204ENST00000526971 CPNE4Q96A23 557 aaPredicted RBP17.03■□□□□ 0.32
PKP3-204ENST00000526971 KAT8Q9H7Z6 458 aaKnown RBP17.03■□□□□ 0.32
PKP3-204ENST00000526971 GALNT8Q9NY28 637 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 ARMCX1Q9P291 453 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 CHRNA9Q9UGM1 479 aa17.03■□□□□ 0.32
PKP3-204ENST00000526971 SPIN1Q9Y657 262 aaPredicted RBP17.03■□□□□ 0.32
PKP3-204ENST00000526971 A0A1W2PNR3 127 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 A8MXE2 369 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 CCDC22O60826 627 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 SS18L1O75177 396 aaPredicted RBP17.02■□□□□ 0.32
PKP3-204ENST00000526971 NPPAP01160 153 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 FKBP2P26885 142 aaKnown RBP17.02■□□□□ 0.32
PKP3-204ENST00000526971 PRKAR1BP31321 381 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 LSP1P33241 339 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 POLR2HP52434 150 aaKnown RBP17.02■□□□□ 0.32
PKP3-204ENST00000526971 RAC3P60763 192 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 SIRPAP78324 504 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 RBBP4Q09028 425 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 CYP51A1Q16850 503 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 MMEL1Q495T6 779 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 SYT14P1Q58G82 188 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 REP15Q6BDI9 236 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 GTF2IRD2BQ6EKJ0 949 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 NANOGP8Q6NSW7 305 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 VWA1Q6PCB0 445 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 FAM214BQ7L5A3 538 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms