RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 A0A0J9YW62 118 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 A0A1W2PNR3 127 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 A0A1W2PNV4 684 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 CCT8L1PA6NM43 557 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 A8MVM7 634 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 KDM4EB2RXH2 506 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 M0QX08 132 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 GPR171O14626 319 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 MSTNO14793 375 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 FRS3O43559 492 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 EIF1BO60739 113 aaKnown RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 SHOX2O60902 331 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 SS18L1O75177 396 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 BCAS1O75363 584 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 PRKD3O94806 890 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 TOXO94900 526 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 MFN2O95140 757 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 STAMBPO95630 424 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 PMS2P2O95744 297 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 TGM6O95932 706 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 OPN1SWP03999 348 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 GPIP06744 558 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 FESP07332 822 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 IL11P20809 199 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 CD247P20963 164 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 SHC1P29353 583 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 ACAA2P42765 397 aaKnown RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 KCNJ5P48544 419 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 DIO1P49895 249 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 AGFG1P52594 562 aaKnown RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZNF136P52737 540 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 DLX5P56178 289 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 PCBP3P57721 371 aaKnown RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 PSME3P61289 254 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC35A1P78382 337 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 LIPEQ05469 1076 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 MYBPHQ13203 477 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 CTU2Q2VPK5 515 aaKnown RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 ALG10BQ5I7T1 473 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 SWT1Q5T5J6 900 aaKnown RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 FAM91A1Q658Y4 838 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 SP5Q6BEB4 398 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 ULK3Q6PHR2 472 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 MEX3BQ6ZN04 569 aaKnown RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 TMPPEQ6ZT21 453 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 SEM1Q6ZVN7 128 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 CCDC80Q76M96 950 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 FAM214BQ7L5A3 538 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 LUZP2Q86TE4 346 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 CALHM3Q86XJ0 350 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 TREML1Q86YW5 311 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 C10orf111Q8N326 155 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 CLIP4Q8N3C7 705 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 RELL2Q8NC24 303 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 NAXEQ8NCW5 288 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 OR6K3Q8NGY3 331 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 VANGL1Q8TAA9 524 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 PIGXQ8TBF5 258 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 BCAS4Q8TDM0 211 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 RNF128Q8TEB7 428 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 FAM162AQ96A26 154 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 MARVELD3Q96A59 401 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC47A1Q96FL8 570 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 TPD52L3Q96J77 140 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 ADGRG7Q96K78 797 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 EPYCQ99645 322 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 MCHR1Q99705 422 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 NPAS1Q99742 590 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 SPOCK3Q9BQ16 436 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 KLHDC3Q9BQ90 382 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 RBM24Q9BX46 236 aaKnown RBP4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 UCK2Q9BZX2 261 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 OR11A1Q9GZK7 315 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 ALG2Q9H553 416 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 C12orf10Q9HB07 376 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 TMEM181Q9P2C4 612 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 KLHL13Q9P2N7 655 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 OSGIN1Q9UJX0 560 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 ADAM21Q9UKJ8 722 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 TRAPPC4Q9Y296 219 aa4.84□□□□□ -1.63
HMGB1P40-201ENST00000525121 MYO18BQ8IUG5 2567 aa4.84□□□□□ -1.64
HMGB1P40-201ENST00000525121 BSNQ9UPA5 3926 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 NBASA2RRP1 2371 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 IGHV3-15A0A0B4J1V0 119 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 A0A1B0GWA3 101 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 TMEM72A0PK05 275 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 TRAPPC13A5PLN9 417 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 M0R3H8 397 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 CXCR6O00574 342 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 NME4O00746 187 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR2T1O43869 369 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 FMO6PO60774 539 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 AQP8O94778 261 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF682O95780 498 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 LGI1O95970 557 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 YES1P07947 543 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 CD8BP10966 210 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 PRG2P13727 222 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 POU2F1P14859 743 aa4.83□□□□□ -1.64
HMGB1P40-201ENST00000525121 CALB2P22676 271 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms