RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 C3orf49Q96BT1 292 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 EFHD2Q96C19 240 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 NTNG2Q96CW9 530 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 REXO5Q96IC2 774 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 ZNF845Q96IR2 970 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 HS6ST2Q96MM7 605 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 COL21A1Q96P44 957 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 SERPINI1Q99574 410 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 SLC39A3Q9BRY0 314 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 MECRQ9BV79 373 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 PINK1Q9BXM7 581 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 ANKRA2Q9H9E1 313 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 KCNK9Q9NPC2 374 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 AHSPQ9NZD4 102 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 MAT2BQ9NZL9 334 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 SH3BP4Q9P0V3 963 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 FETUBQ9UGM5 382 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 PROCRQ9UNN8 238 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 SLC12A4Q9UP95 1085 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 DLGAP4Q9Y2H0 992 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 GPR52Q9Y2T5 361 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 ACOT9Q9Y305 439 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 FREM3P0C091 2139 aa4.7□□□□□ -1.66
CTNNA1-239ENST00000523685 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 C1orf226A1L170 272 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 FRG2CA6NGY1 282 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 CLIC1O00299 241 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 FOXE1O00358 373 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 OR7A17O14581 309 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 ZSCAN12O43309 604 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 HCRTR2O43614 444 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 ZIC3O60481 467 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 GUCY1B2O75343 617 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 CRLF1O75462 422 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 SEMA3DO95025 777 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 PLAUP00749 431 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 MBPP02686 304 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 C2P06681 752 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 CRHP06850 196 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 PEPDP12955 493 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 TSPAN8P19075 237 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 CSNK2A2P19784 350 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 TBXA2RP21731 343 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 MATN1P21941 496 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 DUSP1P28562 367 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 CCKARP32238 428 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 PAFAH1B1P43034 410 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 PPICP45877 212 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 RFX3P48380 749 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 CLK3P49761 638 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 EMDP50402 254 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 ARFIP1P53367 373 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 SUCLG1P53597 346 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 RAE1P78406 368 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 IFT88Q13099 833 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 SNTA1Q13424 505 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 TNK1Q13470 666 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 VEZF1Q14119 521 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 PON3Q15166 354 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 SGCBQ16585 318 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 SH2D4BQ5SQS7 431 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 FRG2Q64ET8 278 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 HMBOX1Q6NT76 420 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 SLC48A1Q6P1K1 146 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 KLC3Q6P597 504 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 C16orf89Q6UX73 402 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 RPS27LQ71UM5 84 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 COMMD6Q7Z4G1 85 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 CENPLQ8N0S6 344 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 CEP112Q8N8E3 955 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 PTGR2Q8N8N7 351 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 L3MBTL4Q8NA19 623 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 OR9A2Q8NGT5 310 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 FNDC9Q8TBE3 224 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 GLMPQ8WWB7 406 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 NPIPB3Q92617 1050 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 KAT2AQ92830 837 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 EXOSC8Q96B26 276 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 PHF21BQ96EK2 531 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 DTNBP1Q96EV8 351 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 SORCS2Q96PQ0 1159 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 FYTTD1Q96QD9 318 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 FRG2BQ96QU4 278 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 HBEGFQ99075 208 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 FAIM2Q9BWQ8 316 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 PRRG4Q9BZD6 226 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 TMPRSS5Q9H3S3 457 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 DSN1Q9H410 356 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 ELOVL6Q9H5J4 265 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 CXorf56Q9H5V9 222 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 SEPSECSQ9HD40 501 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 FARSBQ9NSD9 589 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 LIN7CQ9NUP9 197 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 ASIC5Q9NY37 505 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 ELOVL5Q9NYP7 299 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 MED11Q9P086 117 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 SENP1Q9P0U3 644 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 PRODH2Q9UF12 536 aa4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.69□□□□□ -1.66
CTNNA1-239ENST00000523685 UTS2RQ9UKP6 389 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms