RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 IGKV3D-15A0A087WSY6 115 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 TMED7-TICAM2A0A0A6YYA0 188 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 FAAHO00519 579 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 KRT75O95678 551 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 PMS2P2O95744 297 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 TFPTP0C1Z6 253 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 TFPIP10646 304 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 ETFAP13804 333 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 HOXB9P17482 250 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-223ENST00000523125 MAGEA8P43361 318 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 CLK1P49759 484 aaKnown RBP10.96□□□□□ -0.65
VEGFA-223ENST00000523125 CSNK2A1P68400 391 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-223ENST00000523125 H3F3AP84243 136 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 ITGADQ13349 1161 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 PDK3Q15120 406 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 TAB1Q15750 504 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 MRPL2Q5T653 305 aaKnown RBP10.96□□□□□ -0.65
VEGFA-223ENST00000523125 ABLIM2Q6H8Q1 611 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 ZNF704Q6ZNC4 412 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-223ENST00000523125 C20orf204Q6ZNR8 217 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 MSANTD1Q6ZTZ1 278 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 LRRC75A-AS1Q8N1F1 130 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 LILRB1Q8NHL6 650 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-223ENST00000523125 SLC38A5Q8WUX1 472 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 WDR60Q8WVS4 1066 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 VPS33AQ96AX1 596 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 DNAJA3Q96EY1 480 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 TPT1P8Q9HAU6 139 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 SLCO1B3Q9NPD5 702 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 RLIMQ9NVW2 624 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 OSGIN1Q9UJX0 560 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 TMED7Q9Y3B3 224 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 HDGFL3Q9Y3E1 203 aa10.96□□□□□ -0.65
VEGFA-223ENST00000523125 USF3Q68DE3 2245 aa10.96□□□□□ -0.66
VEGFA-223ENST00000523125 HEATR1Q9H583 2144 aaKnown RBP10.96□□□□□ -0.66
VEGFA-223ENST00000523125 FAM234BA2RU67 622 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 CDHR4A6H8M9 788 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 RAMP1O60894 148 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 SMPD2O60906 423 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 DBIP07108 87 aaKnown RBP10.95□□□□□ -0.66
VEGFA-223ENST00000523125 IL7RP16871 459 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 CCNA2P20248 432 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 FKBP2P26885 142 aaKnown RBP10.95□□□□□ -0.66
VEGFA-223ENST00000523125 ACAA2P42765 397 aaKnown RBP10.95□□□□□ -0.66
VEGFA-223ENST00000523125 SLC1A3P43003 542 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 HTR3AP46098 478 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 MRPL19P49406 292 aaKnown RBP10.95□□□□□ -0.66
VEGFA-223ENST00000523125 NR1H2P55055 460 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 EPS8Q12929 822 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 SHEQ5VZ18 495 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.95□□□□□ -0.66
VEGFA-223ENST00000523125 GALNT5Q7Z7M9 940 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 ATG4DQ86TL0 474 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-223ENST00000523125 VRK2Q86Y07 508 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 FUNDC1Q8IVP5 155 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 CCDC103Q8IW40 242 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 MIER2Q8N344 545 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 HSD17B8Q92506 261 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 GTF2H4Q92759 462 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 KISS1RQ969F8 398 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-223ENST00000523125 ITCHQ96J02 903 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 C7orf26Q96N11 449 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 CCL19Q99731 98 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 ADAM19Q9H013 955 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 PAIP1Q9H074 479 aaKnown RBP10.95□□□□□ -0.66
VEGFA-223ENST00000523125 TRAPPC4Q9Y296 219 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 CHST2Q9Y4C5 530 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 PCDHB14Q9Y5E9 798 aa10.95□□□□□ -0.66
VEGFA-223ENST00000523125 SPIN1Q9Y657 262 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-223ENST00000523125 NSD1Q96L73 2696 aaPredicted RBP10.94□□□□□ -0.66
VEGFA-223ENST00000523125 TMEM72A0PK05 275 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 ZC3H12DA2A288 527 aaKnown RBP10.94□□□□□ -0.66
VEGFA-223ENST00000523125 CFAP73A6NFT4 308 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 HS3ST1O14792 307 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 ZNF208O43345 1280 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 DNPH1O43598 174 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 LYZL6O75951 148 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 TGDSO95455 350 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 ANP32DO95626 131 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 BCHEP06276 602 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 IMPDH2P12268 514 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 COX5AP20674 150 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 IGHV1-2P23083 117 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 IL32P24001 234 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 TACR3P29371 465 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 CRATP43155 626 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 IDH3AP50213 366 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 POLR2HP52434 150 aaKnown RBP10.94□□□□□ -0.66
VEGFA-223ENST00000523125 SLC16A1P53985 500 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 DSTNP60981 165 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 TTMPQ5BVD1 217 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 RPS26P11Q5JNZ5 115 aaPredicted RBP10.94□□□□□ -0.66
VEGFA-223ENST00000523125 Q5PR19 223 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 NCMAPQ5T1S8 102 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 ALKBH2Q6NS38 261 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 SLC2A7Q6PXP3 512 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 ZNF836Q6ZNA1 936 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 BHLHA15Q7RTS1 189 aaPredicted RBP10.94□□□□□ -0.66
VEGFA-223ENST00000523125 PEX5LQ8IYB4 626 aa10.94□□□□□ -0.66
VEGFA-223ENST00000523125 CLIP4Q8N3C7 705 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1043.8 ms