RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 S1PR4O95977 384 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 FTH1P02794 183 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 IRF1P10914 325 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 HOXB2P14652 356 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 TYRP14679 529 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 FUT1P19526 365 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 PVALBP20472 110 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 GSTM3P21266 225 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 NTSR1P30989 418 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 GGT2P36268 569 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 IFNGR2P38484 337 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 IDH2P48735 452 aaKnown RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 IL2P60568 153 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 SELENOTP62341 195 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 RPL19P84098 196 aaKnown RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 BDH1Q02338 343 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 NR6A1Q15406 480 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 SGCBQ16585 318 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 FAM153CQ494X1 144 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 COX19Q49B96 90 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 ZNF691Q5VV52 312 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 PRAMEF8Q5VWM4 474 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 PRAMEF13Q5VWM6 474 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 PRAMEF7Q5VXH5 474 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 CST9LP1Q5W188 147 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 DHRS7BQ6IAN0 325 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 OR4F3Q6IEY1 312 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 PNCKQ6P2M8 343 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 Q6ZNB5 142 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 QSOX2Q6ZRP7 698 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 LINGO2Q7L985 606 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 PIGZQ86VD9 579 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 ZC3HC1Q86WB0 502 aaKnown RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 PAQR7Q86WK9 346 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 LINC00346Q8IVM7 164 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 CCDC117Q8IWD4 279 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 SMYD4Q8IYR2 804 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 HS3ST5Q8IZT8 346 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 TMEM132CQ8N3T6 1108 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 ZBTB2Q8N680 514 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 ACBD7Q8N6N7 88 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 MDGA1Q8NFP4 955 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 OLIG1Q8TAK6 271 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 UBASH3BQ8TF42 649 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 DUSP19Q8WTR2 217 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 ASB15Q8WXK1 588 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 RGP1Q92546 391 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 SEMA4DQ92854 862 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 SLC35C1Q96A29 364 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 SCMH1Q96GD3 660 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 RCC1LQ96I51 464 aaKnown RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 LINC00052Q96N35 136 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 VAT1Q99536 393 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 KLF6Q99612 283 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 EGLN1Q9GZT9 426 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 ARRDC1-AS1Q9H2J1 176 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 GPN1Q9HCN4 374 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 C14orf119Q9NWQ9 140 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 ADA2Q9NZK5 511 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 MARCH2Q9P0N8 246 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 DHCR7Q9UBM7 475 aaKnown RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 GNG8Q9UK08 70 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 ACSL6Q9UKU0 697 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 CTNND2Q9UQB3 1225 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 PKP3Q9Y446 797 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 NPTNQ9Y639 398 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 SPTBN2O15020 2390 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 KCNE1BA0A087WTH5 132 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 EDDM13A0A1B0GTR0 161 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 A0A1W2PPC4 97 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 A0A1W2PQH9 124 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 FBLL1A6NHQ2 334 aaKnown RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 AIPO00170 330 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 BCKDKO14874 412 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 OGG1O15527 345 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 LCMT2O60294 686 aaKnown RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 ABCB7O75027 752 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 STC2O76061 302 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 AQP8O94778 261 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 CLDN9O95484 217 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 AP2A1O95782 977 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 FADS2O95864 444 aaKnown RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 SERPINA1P01009 418 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 RPLP1P05386 114 aaKnown RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 NPSP0C0P6 89 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 UCHL3P15374 230 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 ZNF182P17025 639 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 HLA-GP17693 338 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 NPR2P20594 1047 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 CD247P20963 164 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 ANOS1P23352 680 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 STOMP27105 288 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 SOAT1P35610 550 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 MAP2K4P45985 399 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 RGS4P49798 205 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 RPL14P50914 215 aaKnown RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 SLC37A1P57057 533 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 HSF1Q00613 529 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 AIMP2Q13155 320 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms