RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 C5orf34Q96MH7 638 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 BARD1Q99728 777 aaKnown RBP11.86□□□□□ -0.51
CPNE3-205ENST00000522240 SLC29A1Q99808 456 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 TMEM43Q9BTV4 400 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 DGCR6LQ9BY27 220 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 SLC19A3Q9BZV2 496 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 MED17Q9NVC6 651 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 PLA2G3Q9NZ20 509 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 TMEM5Q9Y2B1 443 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 MAGED1Q9Y5V3 778 aaPredicted RBP11.86□□□□□ -0.51
CPNE3-205ENST00000522240 CFAP46Q8IYW2 2715 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 A0A0G2JMM0 328 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 A0A1W2PPB8 328 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 A0A1W2PRS3 328 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 ELOA3DA6NLF2 546 aaPredicted RBP11.85□□□□□ -0.51
CPNE3-205ENST00000522240 KIR3DP1A8MWS1 328 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 CBR3O75828 277 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 F10P00742 488 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 SP1P08047 785 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 CDH2P19022 906 aaPredicted RBP11.85□□□□□ -0.51
CPNE3-205ENST00000522240 IGFBP5P24593 272 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 ADH6P28332 368 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 TACR3P29371 465 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 TNFSF10P50591 281 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 DAPP51397 102 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 MAP2K6P52564 334 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 RAD23AP54725 363 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 CTBP2P56545 445 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 TOMM34Q15785 309 aaPredicted RBP11.85□□□□□ -0.51
CPNE3-205ENST00000522240 ELOA3BQ3SY89 546 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 C1orf94Q6P1W5 598 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 TTC33Q6PID6 262 aaPredicted RBP11.85□□□□□ -0.51
CPNE3-205ENST00000522240 C5orf46Q6UWT4 87 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 IGFL3Q6UXB1 125 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 RRM2BQ7LG56 351 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 ATG16L2Q8NAA4 619 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 AQP11Q8NBQ7 271 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 ELOA3Q8NG57 546 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 ZBTB8AQ96BR9 441 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 FEVQ99581 238 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF184Q99676 751 aaPredicted RBP11.85□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF556Q9HAH1 456 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 ZFP64Q9NPA5 681 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 DEPPQ9NTK1 212 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 SMPD3Q9NY59 655 aaPredicted RBP11.85□□□□□ -0.51
CPNE3-205ENST00000522240 ENOPH1Q9UHY7 261 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 TMEFF2Q9UIK5 374 aaPredicted RBP11.85□□□□□ -0.51
CPNE3-205ENST00000522240 OSGIN1Q9UJX0 560 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 FBXL2Q9UKC9 423 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 POFUT2Q9Y2G5 429 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 C15orf41Q9Y2V0 281 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 MED31Q9Y3C7 131 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 ORC6Q9Y5N6 252 aa11.85□□□□□ -0.51
CPNE3-205ENST00000522240 TRAV17A0A0B4J275 112 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 G3V3Y1 287 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 MKRN2OSH3BPM6 223 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 GMFGO60234 142 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF17P17021 662 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 PRKACGP22612 351 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 ELK4P28324 431 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 SRD5A2P31213 254 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 APOBEC1P41238 236 aaKnown RBP11.84□□□□□ -0.51
CPNE3-205ENST00000522240 EIF1P41567 113 aaKnown RBP11.84□□□□□ -0.51
CPNE3-205ENST00000522240 OMPP47874 163 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 AQP4P55087 323 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 FOXO1Q12778 655 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 MERTKQ12866 999 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 FOXF1Q12946 379 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 INPP5JQ15735 1006 aaPredicted RBP11.84□□□□□ -0.51
CPNE3-205ENST00000522240 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 GLYR1Q49A26 553 aaPredicted RBP11.84□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF766Q5HY98 468 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 ARSKQ6UWY0 536 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 CD300LDQ6UXZ3 194 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 PARP8Q8N3A8 854 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 GALNT4Q8N4A0 578 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 RNF217Q8TC41 542 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 MAGEE2Q8TD90 523 aaPredicted RBP11.84□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF524Q96C55 264 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 TACO1Q9BSH4 297 aaKnown RBP11.84□□□□□ -0.51
CPNE3-205ENST00000522240 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.84□□□□□ -0.51
CPNE3-205ENST00000522240 UBQLN3Q9H347 655 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 SMURF2Q9HAU4 748 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 KRT84Q9NSB2 600 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 TUBA8Q9NY65 449 aaPredicted RBP11.84□□□□□ -0.51
CPNE3-205ENST00000522240 B4GALT7Q9UBV7 327 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 DKKL1Q9UK85 242 aa11.84□□□□□ -0.51
CPNE3-205ENST00000522240 MRPS18CQ9Y3D5 142 aaKnown RBP11.84□□□□□ -0.51
CPNE3-205ENST00000522240 IGKV1D-42A0A075B6H8 117 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 TMED7-TICAM2A0A0A6YYA0 188 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 KLRC4-KLRK1H3BQV0 150 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 DLGAP1O14490 977 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 KLF4O43474 513 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 PIP5K1CO60331 668 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 ITGB2P05107 769 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 GSTM3P21266 225 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 CXCR1P25024 350 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 FPR3P25089 353 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 DPP4P27487 766 aa11.83□□□□□ -0.52
CPNE3-205ENST00000522240 GSSP48637 474 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms