RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 ATP6V1C2Q8NEY4 427 aa21.8■■□□□ 1.08
PVT1-212ENST00000521951 ABTB1Q969K4 478 aaPredicted RBP21.8■■□□□ 1.08
PVT1-212ENST00000521951 DHRS1Q96LJ7 313 aa21.8■■□□□ 1.08
PVT1-212ENST00000521951 SLX1AQ9BQ83 275 aa21.8■■□□□ 1.08
PVT1-212ENST00000521951 TMEM185BQ9H7F4 350 aa21.8■■□□□ 1.08
PVT1-212ENST00000521951 SPRR3Q9UBC9 169 aa21.8■■□□□ 1.08
PVT1-212ENST00000521951 COL6A6A6NMZ7 2263 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 H3BNX3 289 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 ACTL6AO96019 429 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 CST1P01037 141 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 OPN1LWP04000 364 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 H1F0P07305 194 aaKnown RBP21.79■■□□□ 1.08
PVT1-212ENST00000521951 PEPDP12955 493 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 RAC1P63000 192 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 HSF1Q00613 529 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 TRAM2Q15035 370 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.79■■□□□ 1.087e-6■□□□□ 11.3
PVT1-212ENST00000521951 VASNQ6EMK4 673 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 OR2T5Q6IEZ7 315 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 LILRA2Q8N149 483 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 OR2T29Q8NH02 315 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 MPP4Q96JB8 637 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 S100A14Q9HCY8 104 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 AP4B1Q9Y6B7 739 aa21.79■■□□□ 1.08
PVT1-212ENST00000521951 SPENQ96T58 3664 aaKnown RBP21.78■■□□□ 1.08
PVT1-212ENST00000521951 A0A1B0GTH9 108 aa21.78■■□□□ 1.08
PVT1-212ENST00000521951 AQP7O14520 342 aa21.78■■□□□ 1.08
PVT1-212ENST00000521951 HNRNPRO43390 633 aaKnown RBP21.78■■□□□ 1.08
PVT1-212ENST00000521951 DCST1Q5T197 706 aa21.78■■□□□ 1.08
PVT1-212ENST00000521951 C3orf33Q6P1S2 294 aa21.78■■□□□ 1.08
PVT1-212ENST00000521951 GHDCQ8N2G8 530 aa21.78■■□□□ 1.08
PVT1-212ENST00000521951 CPT1CQ8TCG5 803 aa21.78■■□□□ 1.08
PVT1-212ENST00000521951 TNFRSF10DQ9UBN6 386 aa21.78■■□□□ 1.08
PVT1-212ENST00000521951 GTF3C1Q12789 2109 aa21.78■■□□□ 1.08
PVT1-212ENST00000521951 A0A1W2PRQ8 180 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 ZNF208O43345 1280 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 GADD45GO95257 159 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 POU3F2P20265 443 aaPredicted RBP21.77■■□□□ 1.08
PVT1-212ENST00000521951 SHC1P29353 583 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 LHX2P50458 406 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 MAP2K6P52564 334 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 SMIM11AP58511 58 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 CRYZQ08257 329 aaKnown RBP21.77■■□□□ 1.08
PVT1-212ENST00000521951 DGCR6Q14129 220 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 OR52J3Q8NH60 311 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 TMEM255BQ8WV15 326 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 SMPDL3BQ92485 455 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 STMN2Q93045 179 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 RELTQ969Z4 430 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 TIMP4Q99727 224 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 ZNF426Q9BUY5 554 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 OR11A1Q9GZK7 315 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 ANKRD19PQ9H560 264 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 VNN3Q9NY84 501 aa21.77■■□□□ 1.08
PVT1-212ENST00000521951 SPIN1Q9Y657 262 aaPredicted RBP21.77■■□□□ 1.08
PVT1-212ENST00000521951 IGKV1D-42A0A075B6H8 117 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 ZC3H12DA2A288 527 aaKnown RBP21.76■■□□□ 1.07
PVT1-212ENST00000521951 ADAMDEC1O15204 470 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 ZNHIT1O43257 154 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 KRT36O76013 467 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 PTNP21246 168 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 SFTPDP35247 375 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 EGR4Q05215 589 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 TMEM176BQ3YBM2 270 aaPredicted RBP21.76■■□□□ 1.07
PVT1-212ENST00000521951 ARHGAP11AQ6P4F7 1023 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 P3H2Q8IVL5 708 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 SLC25A43Q8WUT9 341 aaPredicted RBP21.76■■□□□ 1.07
PVT1-212ENST00000521951 STOML1Q9UBI4 398 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 DNAJB9Q9UBS3 223 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 SHANK1Q9Y566 2161 aa21.76■■□□□ 1.07
PVT1-212ENST00000521951 A8MVM7 634 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 GNGT2O14610 69 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 CLOCKO15516 846 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 FKBP2P26885 142 aaKnown RBP21.75■■□□□ 1.07
PVT1-212ENST00000521951 HMGA2P52926 109 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 CLDN20P56880 219 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 PPP1R8Q12972 351 aaKnown RBP21.75■■□□□ 1.07
PVT1-212ENST00000521951 BCL2A1Q16548 175 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 SYT14P1Q58G82 188 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 FGD3Q5JSP0 725 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 TTC33Q6PID6 262 aaPredicted RBP21.75■■□□□ 1.07
PVT1-212ENST00000521951 FGD2Q7Z6J4 655 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 CHERPQ8IWX8 916 aaKnown RBP21.75■■□□□ 1.07
PVT1-212ENST00000521951 SLC7A13Q8TCU3 470 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 STK35Q8TDR2 534 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 LRTOMTQ8WZ04 291 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 DDIT4LQ96D03 193 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 HS6ST2Q96MM7 605 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 FUZQ9BT04 418 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 TMEM43Q9BTV4 400 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 LYVE1Q9Y5Y7 322 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 TRBV4-1A0A0J9YWV2 114 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 TNFRSF11BO00300 401 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 NPIPB7O75200 414 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 TFPIP10646 304 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 FCGR1AP12314 374 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 ZNF708P17019 499 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 FASP25445 335 aa21.75■■□□□ 1.07
PVT1-212ENST00000521951 RBM34P42696 430 aaKnown RBP21.75■■□□□ 1.07
PVT1-212ENST00000521951 SUCLG1P53597 346 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms