RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 CHRM4P08173 479 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 IDO1P14902 403 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 GGT1P19440 569 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 MAGEA8P43361 318 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 HTR3AP46098 478 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 BSPH1Q075Z2 132 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 COX20Q5RI15 118 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 CASP12Q6UXS9 341 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 ATG4DQ86TL0 474 aaPredicted RBP14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 MTDHQ86UE4 582 aaKnown RBP14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 LSRQ86X29 649 aaPredicted RBP14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 PEX5LQ8IYB4 626 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 CIARTQ8N365 385 aaPredicted RBP14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 CADM2Q8N3J6 435 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 ZNF611Q8N823 705 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 KBTBD8Q8NFY9 601 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 OIT3Q8WWZ8 545 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 NEUROG1Q92886 237 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 ARL5BQ96KC2 179 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 TRNT1Q96Q11 434 aaKnown RBP14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 CCDC106Q9BWC9 280 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 GSX2Q9BZM3 304 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 ALG2Q9H553 416 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 P2RX2Q9UBL9 471 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 POU2F3Q9UKI9 436 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 TMED7Q9Y3B3 224 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 GPR45Q9Y5Y3 372 aa14.3□□□□□ -0.12
IGHV3-42-201ENST00000520410 ZNF724A8MTY0 619 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 MRPL33O75394 65 aaKnown RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 CNOT4O95628 575 aaKnown RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 LY6G6DO95868 133 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 IL6P05231 212 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 HEXAP06865 529 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 DBIP07108 87 aaKnown RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 NID1P14543 1247 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 HOXB4P17483 251 aaPredicted RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 NCF2P19878 526 aaPredicted RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 EDNRAP25101 427 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 TACR3P29371 465 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 POLR2HP52434 150 aaKnown RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 VEZF1Q14119 521 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 SLC9B1Q4ZJI4 515 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 PDCD4Q53EL6 469 aaKnown RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 TNFAIP8L3Q5GJ75 292 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 NCMAPQ5T1S8 102 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 MRPL2Q5T653 305 aaKnown RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 C9orf135Q5VTT2 229 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 ABLIM2Q6H8Q1 611 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 LRRC74BQ6ZQY2 392 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 CMIPQ8IY22 773 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 GLB1L3Q8NCI6 653 aaPredicted RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 FAM71CQ8NEG0 241 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 OR52N5Q8NH56 324 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 TRMT61AQ96FX7 289 aaKnown RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 NAA11Q9BSU3 229 aaPredicted RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 SAP130Q9H0E3 1048 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 SLC38A1Q9H2H9 487 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 EXOSC3Q9NQT5 275 aaKnown RBP14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 UPB1Q9UBR1 384 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 HDGFL3Q9Y3E1 203 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 ITPR3Q14573 2671 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 ABCA4P78363 2273 aa14.29□□□□□ -0.12
IGHV3-42-201ENST00000520410 A0A1W2PR80 420 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 TMEM72A0PK05 275 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 PRAMEF27A3QJZ7 478 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 CFAP73A6NFT4 308 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 ETV2O00321 342 aaPredicted RBP14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 GPR171O14626 319 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 UBDO15205 165 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 PMS2P2O95744 297 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 ETFAP13804 333 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 IGHV1-2P23083 117 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 CXCR1P25024 350 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 PCSK6P29122 969 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 CDKN1AP38936 164 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 CDH11P55287 796 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 DSTNP60981 165 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 STX1BP61266 288 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 COPZ1P61923 177 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 TXNL4AP83876 142 aaKnown RBP14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 LIN52Q52LA3 116 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 PRSS57Q6UWY2 283 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 CCDC103Q8IW40 242 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 ITCHQ96J02 903 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 COX4I2Q96KJ9 171 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 USB1Q9BQ65 265 aaKnown RBP14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 MTHFD2LQ9H903 347 aaPredicted RBP14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 CALML5Q9NZT1 146 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 TMEM181Q9P2C4 612 aa14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 ING1Q9UK53 422 aaPredicted RBP14.28□□□□□ -0.12
IGHV3-42-201ENST00000520410 AGAP5A6NIR3 686 aa14.27□□□□□ -0.13
IGHV3-42-201ENST00000520410 ABCD4O14678 606 aa14.27□□□□□ -0.13
IGHV3-42-201ENST00000520410 DNAJA2O60884 412 aa14.27□□□□□ -0.13
IGHV3-42-201ENST00000520410 SNNO75324 88 aaPredicted RBP14.27□□□□□ -0.13
IGHV3-42-201ENST00000520410 GUSBP08236 651 aa14.27□□□□□ -0.13
IGHV3-42-201ENST00000520410 GKN3PP0CG01 181 aa14.27□□□□□ -0.13
IGHV3-42-201ENST00000520410 FKBP2P26885 142 aaKnown RBP14.27□□□□□ -0.13
IGHV3-42-201ENST00000520410 ZNF83P51522 516 aa14.27□□□□□ -0.13
IGHV3-42-201ENST00000520410 CRISP3P54108 245 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms