RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 VASNQ6EMK4 673 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 WDR88Q6ZMY6 472 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 NKAIN4Q8IVV8 208 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 GHDCQ8N2G8 530 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 SLC25A43Q8WUT9 341 aaPredicted RBP16.06■□□□□ 0.16
SDC2-205ENST00000520233 ABTB1Q969K4 478 aaPredicted RBP16.06■□□□□ 0.16
SDC2-205ENST00000520233 HS6ST2Q96MM7 605 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 SLX1AQ9BQ83 275 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 ZNF426Q9BUY5 554 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 STOML1Q9UBI4 398 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 DNAJB9Q9UBS3 223 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 A8MVM7 634 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 H3BML4 177 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 GNGT2O14610 69 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 CLOCKO15516 846 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 DEAF1O75398 565 aaPredicted RBP16.05■□□□□ 0.16
SDC2-205ENST00000520233 PEPDP12955 493 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 CCNA2P20248 432 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 CLK1P49759 484 aaKnown RBP16.05■□□□□ 0.16
SDC2-205ENST00000520233 TDGF1P3P51864 188 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 HMGA2P52926 109 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 GK3PQ14409 553 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 ATP6AP1Q15904 470 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 BCL2A1Q16548 175 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 ARHGAP11AQ6P4F7 1023 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 TTC33Q6PID6 262 aaPredicted RBP16.05■□□□□ 0.16
SDC2-205ENST00000520233 LILRA2Q8N149 483 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 STK35Q8TDR2 534 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 DDIT4LQ96D03 193 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 TMEM43Q9BTV4 400 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 REEP1Q9H902 201 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 SPRR3Q9UBC9 169 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 LYVE1Q9Y5Y7 322 aa16.05■□□□□ 0.16
SDC2-205ENST00000520233 ZZEF1O43149 2961 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 IGKV1D-42A0A075B6H8 117 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 GJE1A6NN92 205 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 TNFRSF11BO00300 401 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 LDLRP01130 860 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 POU3F2P20265 443 aaPredicted RBP16.04■□□□□ 0.16
SDC2-205ENST00000520233 LIMS1P48059 325 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 STARP49675 285 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 LHX2P50458 406 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 CRYZQ08257 329 aaKnown RBP16.04■□□□□ 0.16
SDC2-205ENST00000520233 FOXD4Q12950 439 aaPredicted RBP16.04■□□□□ 0.16
SDC2-205ENST00000520233 SYT14P1Q58G82 188 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 FGD3Q5JSP0 725 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 C5orf46Q6UWT4 87 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 ATP6V1C2Q8NEY4 427 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 OR4C15Q8NGM1 316 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 OR52J3Q8NH60 311 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 TMEM255BQ8WV15 326 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 TMEM239Q8WW34 195 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 ACOT11Q8WXI4 607 aaPredicted RBP16.04■□□□□ 0.16
SDC2-205ENST00000520233 LRTOMTQ8WZ04 291 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 FUZQ9BT04 418 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 SLC19A3Q9BZV2 496 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 VNN3Q9NY84 501 aa16.04■□□□□ 0.16
SDC2-205ENST00000520233 RRP15Q9Y3B9 282 aaKnown RBP16.04■□□□□ 0.16
SDC2-205ENST00000520233 A0A087WUU8 490 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 TRBV4-1A0A0J9YWV2 114 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 A0A1B0GTH9 108 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 OR14I1A6ND48 311 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 NPIPB7O75200 414 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 ZNF708P17019 499 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 SHC1P29353 583 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 HSF1Q00613 529 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 EGR4Q05215 589 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 TMEM176BQ3YBM2 270 aaPredicted RBP16.03■□□□□ 0.16
SDC2-205ENST00000520233 DCST1Q5T197 706 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 PODNL1Q6PEZ8 512 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 RNF113BQ8IZP6 322 aaKnown RBP16.03■□□□□ 0.16
SDC2-205ENST00000520233 CPT1CQ8TCG5 803 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 SLC7A13Q8TCU3 470 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 SARAFQ96BY9 339 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 BBC3Q96PG8 261 aaPredicted RBP16.03■□□□□ 0.16
SDC2-205ENST00000520233 ALPK1Q96QP1 1244 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 EPYCQ99645 322 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 TIMP4Q99727 224 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 BDH2Q9BUT1 245 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 POTEKPQ9BYX7 375 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 OR11A1Q9GZK7 315 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 TMEM185BQ9H7F4 350 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 TMCC3Q9ULS5 477 aa16.03■□□□□ 0.16
SDC2-205ENST00000520233 SAMHD1Q9Y3Z3 626 aaKnown RBP16.03■□□□□ 0.16
SDC2-205ENST00000520233 ZC3H12DA2A288 527 aaKnown RBP16.02■□□□□ 0.16
SDC2-205ENST00000520233 IGF2P01344 180 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 TFPIP10646 304 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 CPN1P15169 458 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 DNAJA1P31689 397 aaKnown RBP16.02■□□□□ 0.16
SDC2-205ENST00000520233 SFTPDP35247 375 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 UGT2B15P54855 530 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 MLLT10P55197 1068 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 CLDN18P56856 261 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 EXOC3L2Q2M3D2 409 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 C1orf140Q5VVS0 124 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 HMBOX1Q6NT76 420 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 ZNF730Q6ZMV8 503 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 GGNQ86UU5 652 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 SMPDL3BQ92485 455 aa16.02■□□□□ 0.16
SDC2-205ENST00000520233 KLHL15Q96M94 604 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms