RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ESCO2Q56NI9 601 aa10.1□□□□□ -0.79
PCDHGA1-202ENST00000517417 NXPE3Q969Y0 559 aa10.1□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR7D2Q96RA2 312 aa10.1□□□□□ -0.79
PCDHGA1-202ENST00000517417 NXF2Q9GZY0 626 aaKnown RBP10.1□□□□□ -0.79
PCDHGA1-202ENST00000517417 ZNF701Q9NV72 531 aaPredicted RBP10.1□□□□□ -0.79
PCDHGA1-202ENST00000517417 MEMO1Q9Y316 297 aa10.1□□□□□ -0.79
PCDHGA1-202ENST00000517417 CPEP16870 476 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 CRYBB2P43320 205 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 FNTBP49356 437 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 GZMKP49863 264 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 RIDAP52758 137 aaKnown RBP10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 ACTA2P62736 377 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 ACTG2P63267 376 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 SERTAD2Q14140 314 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 DCST2Q5T1A1 773 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 HES5Q5TA89 166 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 C18orf63Q68DL7 685 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 LMF1Q96S06 567 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 NT5DC2Q9H857 520 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 TAAR2Q9P1P5 351 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 CD160O95971 181 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 NPPBP16860 134 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 FRKP42685 505 aaPredicted RBP10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 LIM2P55344 173 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 ERVK-25P63136 954 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 CDKN3Q16667 212 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 ALG10Q5BKT4 473 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 FAM111BQ6SJ93 734 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 ZNF440Q8IYI8 595 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 ZNF619Q8N2I2 560 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 FTMTQ8N4E7 242 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR2T35Q8NGX2 323 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 ACOT11Q8WXI4 607 aaPredicted RBP10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 LINC01599Q8WXQ3 324 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 NEURL3Q96EH8 262 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 SLC6A7Q99884 636 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 TIMM29Q9BSF4 260 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 STRADBQ9C0K7 418 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 PARPBPQ9NWS1 579 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 RASD1Q9Y272 281 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 TVP23AA6NH52 213 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 CASC3O15234 703 aaKnown RBP10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 NARSO43776 548 aaKnown RBP10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 GPR75O95800 540 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 CD3GP09693 182 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 ENDOUP21128 410 aaKnown RBP10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 RAE1P78406 368 aaKnown RBP10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 DEFA5Q01523 94 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 NFATC4Q14934 902 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 PYHIN1Q6K0P9 492 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 ACSM5Q6NUN0 579 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 TMEM184AQ6ZMB5 413 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 PGAM5Q96HS1 289 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 FOXN4Q96NZ1 517 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 A4GALTQ9NPC4 353 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 AK6Q9Y3D8 172 aaKnown RBP10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 PLEKHM1Q9Y4G2 1056 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 V9GYH0 126 aa10.09□□□□□ -0.79
PCDHGA1-202ENST00000517417 VNN2O95498 520 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 FOSL2P15408 326 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 CSNK1EP49674 416 aaKnown RBP10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 MAT1AQ00266 395 aaKnown RBP10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 PLP2Q04941 152 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 POU4F2Q12837 409 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 GRK1Q15835 563 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 ENTPD8Q5MY95 495 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 EEF1A1P5Q5VTE0 462 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF765Q7L2R6 523 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 BEST4Q8NFU0 473 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 LRIT1Q9P2V4 623 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF16P17020 682 aaPredicted RBP10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 GIFP27352 417 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 CD38P28907 300 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 PKLRP30613 574 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 PSMB10P40306 273 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 EMP2P54851 167 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 P2RX3P56373 397 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 HYAL4Q2M3T9 481 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF750Q32MQ0 723 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 TCTN3Q6NUS6 607 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 MTFR2Q6P444 385 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR52D1Q9H346 318 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 NUBP2Q9Y5Y2 271 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 TRDV1A0A1B0GX56 115 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 IGHA2P01877 340 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 CPMP14384 443 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 HOXC8P31273 242 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 RFX2P48378 723 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 POU3F4P49335 361 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 GPLD1P80108 840 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 TLE3Q04726 772 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 IRF3Q14653 427 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 TRAM1Q15629 374 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 LTB4RQ15722 352 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 FAM189A2Q15884 450 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 GARNL3Q5VVW2 1013 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 LRRC28Q86X40 367 aaPredicted RBP10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF584Q8IVC4 421 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 RDH10Q8IZV5 341 aa10.08□□□□□ -0.8
PCDHGA1-202ENST00000517417 FAM26EQ8N5C1 309 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms