RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 SMUG1Q53HV7 270 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 TMEM69Q5SWH9 247 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 SPOUT1Q5T280 376 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 GPRC6AQ5T6X5 926 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 ALKBH5Q6P6C2 394 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 TMEM154Q6P9G4 183 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 CYP26C1Q6V0L0 522 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 DNM1P46Q6ZS02 220 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 TMPPEQ6ZT21 453 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 C11orf57Q6ZUT1 292 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 LINC00173Q6ZV60 143 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 CYP4V2Q6ZWL3 525 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 CAMKMTQ7Z624 323 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 TSEN54Q7Z6J9 526 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 CPLX4Q7Z7G2 160 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 THNSL1Q8IYQ7 743 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 LINC00518Q8N0U6 118 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 FAM184AQ8NB25 1140 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 CCDC54Q8NEL0 328 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 OR51S1Q8NGJ8 323 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 OR52J3Q8NH60 311 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 NCOA7Q8NI08 942 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 SPATA18Q8TC71 538 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 PDCD6IPQ8WUM4 868 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 C15orf40Q8WUR7 153 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 RAD54LQ92698 747 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 DLX4Q92988 240 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 SLC25A46Q96AG3 418 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 TMCO6Q96DC7 493 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 TRIM44Q96DX7 344 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 SAT2Q96F10 170 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 VMP1Q96GC9 406 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 PGLYRP4Q96LB8 373 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 AMDHD1Q96NU7 426 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 CAMK2N2Q96S95 79 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 S1PR3Q99500 378 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 KATNB1Q9BVA0 655 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 TRIM7Q9C029 511 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 NAT10Q9H0A0 1025 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 CYSTM1Q9H1C7 97 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 C20orf85Q9H1P6 137 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 SRMSQ9H3Y6 488 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 ZSCAN16Q9H4T2 348 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 LMAN1LQ9HAT1 526 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 DDX28Q9NUL7 540 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 RBM28Q9NW13 759 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 PSD3Q9NYI0 1048 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 RRN3Q9NYV6 651 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 VPS54Q9P1Q0 977 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 SUCLA2Q9P2R7 463 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 PCYOX1Q9UHG3 505 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 DIMT1Q9UNQ2 313 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 SAMD4AQ9UPU9 718 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 KLK5Q9Y337 293 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 EXOSC1Q9Y3B2 195 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 OR10H1Q9Y4A9 318 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 LRRFIP2Q9Y608 721 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 ALG6Q9Y672 507 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 STARD9Q9P2P6 4700 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 NFASCO94856 1347 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 KIF7Q2M1P5 1343 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 PDZD2O15018 2839 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 RTTNQ86VV8 2226 aa-0.7□□□□□ -2.52
SNORA40.17-201ENST00000517256 ALMS1Q8TCU4 4167 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 ZNF106Q9H2Y7 1883 aaKnown RBP-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 PXDNLA1KZ92 1463 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 SYNJ2O15056 1496 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 A0A1W2PQ09 198 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 CEACAM18A8MTB9 384 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 H3BMH7 237 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 LY6LH3BQJ8 138 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 H3BRN7 92 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 PEX7O00628 323 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 TM9SF1O15321 606 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 VEGFDO43915 354 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 SLC19A2O60779 497 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 DDX58O95786 925 aaKnown RBP-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 TXNDC12O95881 172 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 IGSF6O95976 241 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 BGLAPP02818 100 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 P04436 131 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 BCHEP06276 602 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 PYGLP06737 847 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 IGFBP1P08833 259 aaPredicted RBP-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 SLC35G4P0C7Q5 338 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 TPBGLP0DKB5 382 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 IGHV3-43DP0DP04 118 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 B4GALT1P15291 398 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 ATF6P18850 670 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 NTF3P20783 257 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 ATP6V1B2P21281 511 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 CXCR2P25025 360 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 PTAFRP25105 342 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 RFC2P35250 354 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 ADRA1AP35348 466 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 COILP38432 576 aaPredicted RBP-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 NBL1P41271 181 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 MAGEA5P43359 124 aa-0.71□□□□□ -2.52
SNORA40.17-201ENST00000517256 IDH2P48735 452 aaKnown RBP-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms