RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 CCL21O00585 134 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TNFSF11O14788 317 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 HNRNPRO43390 633 aaKnown RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CHP2O43745 196 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 RRP9O43818 475 aaKnown RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 EIF1BO60739 113 aaKnown RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 GCM2O75603 506 aaPredicted RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 KRT36O76013 467 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 GADD45GO95257 159 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CST1P01037 141 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 IL2RAP01589 272 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CPN1P15169 458 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ATP6V1B2P21281 511 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ENPP1P22413 925 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ACVR2AP27037 513 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 RBM34P42696 430 aaKnown RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ACAA2P42765 397 aaKnown RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZNF136P52737 540 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SMSP52788 366 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CDH12P55289 794 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 GFRA1P56159 465 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CTBP2P56545 445 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CLDN15P56746 228 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 MS4A2Q01362 244 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PIN1Q13526 163 aaPredicted RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 C1DQ13901 141 aaKnown RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TOMM34Q15785 309 aaPredicted RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SYT14P1Q58G82 188 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SLC25A53Q5H9E4 307 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 NHSL2Q5HYW2 709 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 DCST1Q5T197 706 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 C1orf185Q5T7R7 199 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 EEF1A1P5Q5VTE0 462 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 C1orf140Q5VVS0 124 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZNF324BQ6AW86 544 aaPredicted RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 VASNQ6EMK4 673 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TMEM225Q6GV28 225 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 OR2A2Q6IF42 318 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZFP1Q6P2D0 407 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 B3GNT6Q6ZMB0 384 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ASRGL1Q7L266 308 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 GDF7Q7Z4P5 450 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CD163Q86VB7 1156 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 RBM45Q8IUH3 476 aaKnown RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SIAH3Q8IW03 269 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZNF843Q8N446 348 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 LINC00471Q8N535 108 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 OR2V1Q8NHB1 315 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PIGXQ8TBF5 258 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 STK35Q8TDR2 534 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ADAMTS16Q8TE57 1224 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 OSTF1Q92882 214 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 RELTQ969Z4 430 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CPNE4Q96A23 557 aaPredicted RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 C3orf49Q96BT1 292 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SLC25A36Q96CQ1 311 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 LRRC46Q96FV0 321 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 BBC3Q96PG8 261 aaPredicted RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZNF300Q96RE9 604 aaPredicted RBP4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TIMP4Q99727 224 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PIP5K1AQ99755 562 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TM9SF2Q99805 663 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SLX1AQ9BQ83 275 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 PRR14Q9BWN1 585 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CHID1Q9BWS9 393 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 POTEKPQ9BYX7 375 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 AMBRA1Q9C0C7 1298 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZNF556Q9HAH1 456 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 FANCFQ9NPI8 374 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 COQ3Q9NZJ6 369 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 RHCGQ9UBD6 479 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 OSGIN1Q9UJX0 560 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TMEM5Q9Y2B1 443 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 NTNG1Q9Y2I2 539 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TESMINQ9Y4I5 508 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 LIPGQ9Y5X9 500 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 DOCK10Q96BY6 2186 aa4.92□□□□□ -1.62
SCARNA16.4-201ENST00000516956 A0A087WUJ7 227 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 A0A0B4J2E0 115 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 A0A1B0GX12 115 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 A0A1W2PNR3 127 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TMEM72A0PK05 275 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SLC22A20A6NK97 555 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 TNFRSF11BO00300 401 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 KPNA4O00629 521 aaPredicted RBP4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 GPR171O14626 319 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ACOT8O14734 319 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 DNPH1O43598 174 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 AKAP8O43823 692 aaKnown RBP4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 CXCL13O43927 109 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 OR10H3O60404 316 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 FKBP6O75344 327 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 BCAS1O75363 584 aaPredicted RBP4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 DEAF1O75398 565 aaPredicted RBP4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 LDLRP01130 860 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 SAGP10523 405 aaPredicted RBP4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 IFI30P13284 250 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 ZNF708P17019 499 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 GNLYP22749 145 aa4.91□□□□□ -1.62
SCARNA16.4-201ENST00000516956 FASP25445 335 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms