RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 THRBP10828 461 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF14P17017 642 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 IL1RNP18510 177 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 TBXA2RP21731 343 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 FSHRP23945 695 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 FEN1P39748 380 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ACAA2P42765 397 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 KIR2DL3P43628 341 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ELP6Q0PNE2 266 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 GAMTQ14353 236 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 UGT8Q16880 541 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 NHLRC3Q5JS37 347 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 LY6G5CQ5SRR4 150 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 FRG2Q64ET8 278 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ADNP2Q6IQ32 1131 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 C3P1Q6ZMU1 363 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 WDR88Q6ZMY6 472 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 LHFPL2Q6ZUX7 228 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 TMPRSS11FQ6ZWK6 438 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 OTOP2Q7RTS6 562 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 TECPR1Q7Z6L1 1165 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 CCDC190Q86UF4 302 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 KLHDC8AQ8IYD2 350 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 OR1E3Q8WZA6 343 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 RAB3CQ96E17 227 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 FRG2BQ96QU4 278 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 PCBD2Q9H0N5 130 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 NT5DC2Q9H857 520 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SCN3BQ9NY72 215 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 VNN3Q9NY84 501 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 GNG8Q9UK08 70 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SLC27A6Q9Y2P4 619 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SLC5A10A0PJK1 596 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 OR2AG2A6NM03 316 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 E7EQ34 232 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SPINT1O43278 529 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 CHST10O43529 356 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 AIREO43918 545 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ITGA10O75578 1167 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 LRATO95237 230 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SERPINA1P01009 418 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 CST1P01037 141 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 CTXN2P0C2S0 81 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 CYP4B1P13584 511 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 PCMT1P22061 227 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 HSD11B1P28845 292 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 EMX1Q04741 257 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 RASGEF1BQ0VAM2 473 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 NPRL3Q12980 569 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 LGALSLQ3ZCW2 172 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ARSJQ5FYB0 599 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 PRSS36Q5K4E3 855 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 OR4F3Q6IEY1 312 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 NOXRED1Q6NXP6 359 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 THNSL2Q86YJ6 484 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SVBPQ8N300 66 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SYNPOQ8N3V7 929 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 C12orf76Q8N812 135 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 OR11H4Q8NGC9 324 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 FAM162AQ96A26 154 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 APOLD1Q96LR9 279 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 RIOK2Q9BVS4 552 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 EBPLQ9BY08 206 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SMOC1Q9H4F8 434 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 MAGIXQ9H6Y5 334 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SLC28A3Q9HAS3 691 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ZFP64Q9NPA5 681 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ACSS1Q9NUB1 689 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 TMEFF2Q9UIK5 374 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SLC9A8Q9Y2E8 581 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 TMEM72A0PK05 275 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 WNT9AO14904 365 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ORC5O43913 435 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 TSPAN2O60636 221 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 AP2A2O94973 939 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ETHE1O95571 254 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 HIST1H2AGP0C0S8 130 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 OR8U8P0C7N1 319 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 HIST1H2ADP20671 130 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 S100A3P33764 101 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ETV6P41212 452 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 CAMLGP49069 296 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 POLR2LP62875 67 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 RAE1P78406 368 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 CDK6Q00534 326 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 PIN1Q13526 163 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 CTU2Q2VPK5 515 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ARSIQ5FYB1 569 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 C6orf141Q5SZD1 244 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 B3GNT8Q7Z7M8 397 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 RASGEF1AQ8N9B8 481 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 AGBL5Q8NDL9 886 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 OR6K3Q8NGY3 331 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 OR5K1Q8NHB7 308 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SKA2Q8WVK7 121 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 KAT2AQ92830 837 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 HIST1H2AHQ96KK5 128 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 ERMAPQ96PL5 475 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 HIST1H2AJQ99878 128 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 MYOCQ99972 504 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms