RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 SYT5O00445 386 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 CDC123O75794 336 aaPredicted RBP12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 SBK2P0C263 348 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 NAT1P18440 290 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 ART1P52961 327 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 CDK3Q00526 305 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 ARHGAP19Q14CB8 494 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 EXOSC7Q15024 291 aaKnown RBP12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 TAF13Q15543 124 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 TMEM215Q68D42 235 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 NIPAL3Q6P499 406 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 BTN2A1Q7KYR7 527 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 OR52I2Q8NH67 350 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 SGTBQ96EQ0 304 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 HHIPQ96QV1 700 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 COMMD4Q9H0A8 199 aa12.89□□□□□ -0.35
TSPAN17-208ENST00000514705 CHD5Q8TDI0 1954 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 A0A1W2PP55 124 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 SHISA3A0PJX4 238 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 M6PRP20645 277 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 NFYAP23511 347 aaPredicted RBP12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 ITPKBP27987 946 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 CCR2P41597 374 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 UBE2MP61081 183 aaKnown RBP12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 TMEM91Q6ZNR0 172 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 CHST4Q8NCG5 386 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 OR52E1Q8NGJ3 308 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 BRIX1Q8TDN6 353 aaKnown RBP12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 SLC35A4Q96G79 324 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 NOX4Q9NPH5 578 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 MAN2B1O00754 1011 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 DBIP07108 87 aaKnown RBP12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 AGFG1P52594 562 aaKnown RBP12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 NRG3P56975 720 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 ZNF234Q14588 700 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 C17orf47Q8NEP4 570 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 ZNF563Q8TA94 476 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 ASB12Q8WXK4 309 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 DERL3Q96Q80 235 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 CACNA1IQ9P0X4 2223 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 ZNF593O00488 134 aaPredicted RBP12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 CDC42EP2O14613 210 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 B4GALT2O60909 372 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 FBXW4P57775 412 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 ACTA2P62736 377 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 ACTG2P63267 376 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 AADACL4Q5VUY2 407 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 RPL13AP3Q6NVV1 102 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 ARHGAP11AQ6P4F7 1023 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 ASPGQ86U10 573 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 IQCF2Q8IXL9 164 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 SLC35F2Q8IXU6 374 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 POGLUT1Q8NBL1 392 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 BCL2L10Q9HD36 194 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 SDHAF2Q9NX18 166 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 FBXL4Q9UKA2 621 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 SCN3AQ9NY46 2000 aa12.88□□□□□ -0.35
TSPAN17-208ENST00000514705 TACSTD2P09758 323 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 CEBPBP17676 345 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 RAD52P43351 418 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 PCBP4P57723 403 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 ITPRIPL2Q3MIP1 535 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 OLFML2AQ68BL7 652 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 ABHD17CQ6PCB6 329 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 COMTD1Q86VU5 262 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 NSMAFQ92636 917 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 ZC3HAV1LQ96H79 300 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 MAN2C1Q9NTJ4 1040 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 LYARQ9NX58 379 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 PLEKHA6Q9Y2H5 1048 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 NOP16Q9Y3C1 178 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 PLEKHM1Q9Y4G2 1056 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 NARSO43776 548 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 WNT1P04628 370 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 GAS6Q14393 721 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 ENPP7Q6UWV6 458 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 BAIAP2L2Q6UXY1 529 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 ZNF793Q6ZN11 406 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 GRAMD2AQ8IUY3 354 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 OR4D9Q8NGE8 314 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 OR6N2Q8NGY6 317 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 SFXN5Q8TD22 340 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 CNOT9Q92600 299 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 OR52A5Q9H2C5 316 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 EPHX3Q9H6B9 360 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 MYEF2Q9P2K5 600 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 CAMK2AQ9UQM7 478 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 SIRT4Q9Y6E7 314 aaPredicted RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 TRAV18A0A075B6X5 111 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 KANTRA0A1W2PQU2 76 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 ATF1P18846 271 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 TRA2BP62995 288 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 SIRPAP78324 504 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 FAM69AQ5T7M9 428 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 BPHLQ86WA6 291 aaPredicted RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 ZNF547Q8IVP9 402 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 MFFQ9GZY8 342 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 TRPV4Q9HBA0 871 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 IL20Q9NYY1 176 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 KLK11Q9UBX7 282 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms