RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TIGARQ9NQ88 270 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 KLHL28Q9NXS3 571 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
USP46-209ENST00000514536 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
USP46-209ENST00000514536 CHRNA9Q9UGM1 479 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 SLC13A4Q9UKG4 626 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 MCTS1Q9ULC4 181 aaKnown RBP12.51□□□□□ -0.41
USP46-209ENST00000514536 AP3M1Q9Y2T2 418 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 SPIN1Q9Y657 262 aaPredicted RBP12.51□□□□□ -0.41
USP46-209ENST00000514536 SPTBN1Q01082 2364 aaKnown RBP12.5□□□□□ -0.41
USP46-209ENST00000514536 TMEM72A0PK05 275 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 C19orf84I3L1E1 186 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 OPRM1P35372 400 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 PSME3P61289 254 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 LIPEQ05469 1076 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 VEZF1Q14119 521 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 SLC25A35Q3KQZ1 300 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 SYT14P1Q58G82 188 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 OR2A2Q6IF42 318 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 CCDC80Q76M96 950 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 MICU2Q8IYU8 434 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 RELL2Q8NC24 303 aaPredicted RBP12.5□□□□□ -0.41
USP46-209ENST00000514536 GPR32P1Q8NGA4 272 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 SLC25A43Q8WUT9 341 aaPredicted RBP12.5□□□□□ -0.41
USP46-209ENST00000514536 TAMM41Q96BW9 452 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 WFDC6Q9BQY6 131 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 OR11A1Q9GZK7 315 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 RNF122Q9H9V4 155 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 TAGLN3Q9UI15 199 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 PRDM4Q9UKN5 801 aa12.5□□□□□ -0.41
USP46-209ENST00000514536 ELOVL7A1L3X0 281 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 NME4O00746 187 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 IL18BPO95998 194 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 FCGR2AP12318 317 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 CXCR1P25024 350 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 FKBP2P26885 142 aaKnown RBP12.49□□□□□ -0.41
USP46-209ENST00000514536 KCNJ5P48544 419 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 TMPPEQ6ZT21 453 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 FITM2Q8N6M3 262 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 CNEP1R1Q8N9A8 125 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 CPNE4Q96A23 557 aaPredicted RBP12.49□□□□□ -0.41
USP46-209ENST00000514536 ARL5BQ96KC2 179 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 SFXN3Q9BWM7 321 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 CHST11Q9NPF2 352 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 CLEC4AQ9UMR7 237 aa12.49□□□□□ -0.41
USP46-209ENST00000514536 A0A1W2PNV4 684 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 M0R3H8 397 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 SULT2B1O00204 365 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 ZNF208O43345 1280 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 TNFSF13O75888 250 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 LGI1O95970 557 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 CD247P20963 164 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 ENPP1P22413 925 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 KIR2DL2P43627 348 aaPredicted RBP12.48□□□□□ -0.41
USP46-209ENST00000514536 CLK1P49759 484 aaKnown RBP12.48□□□□□ -0.41
USP46-209ENST00000514536 DIO1P49895 249 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 CRYBA2P53672 197 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 RGS8P57771 180 aaPredicted RBP12.48□□□□□ -0.41
USP46-209ENST00000514536 RAC3P60763 192 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 TFF3Q07654 80 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 BNIP2Q12982 314 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 ZNF239Q16600 458 aaKnown RBP12.48□□□□□ -0.41
USP46-209ENST00000514536 FAM91A1Q658Y4 838 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 OR52E4Q8NGH9 312 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 C3orf49Q96BT1 292 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 DDIT4LQ96D03 193 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 RPS6KB2Q9UBS0 482 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 ARHGAP21Q5T5U3 1957 aa12.48□□□□□ -0.41
USP46-209ENST00000514536 IGHV3-15A0A0B4J1V0 119 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 ZC3H12DA2A288 527 aaKnown RBP12.47□□□□□ -0.41
USP46-209ENST00000514536 EEF1E1-BLOC1S5C9J1V9 151 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 NDUFAB1O14561 156 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 EEF1E1O43324 174 aaKnown RBP12.47□□□□□ -0.41
USP46-209ENST00000514536 TPST2O60704 377 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 PLGP00747 810 aaPredicted RBP12.47□□□□□ -0.41
USP46-209ENST00000514536 CRHP06850 196 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 FESP07332 822 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 C8BP07358 591 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 HTR2AP28223 471 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 KDELR2P33947 212 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 GSK3BP49841 420 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 SIRPAP78324 504 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 MYBPHQ13203 477 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 EEF1A1P5Q5VTE0 462 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 GTF2IRD2BQ6EKJ0 949 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 GTF2IRD2Q86UP8 949 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 MCEMP1Q8IX19 187 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 BCAS4Q8TDM0 211 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 STARD4Q96DR4 205 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 ARHGDIGQ99819 225 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 ZNF559Q9BR84 538 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 TRIM2Q9C040 744 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 EVA1AQ9H8M9 152 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 TMEM27Q9HBJ8 222 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 ADA2Q9NZK5 511 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 HDGFL3Q9Y3E1 203 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 TEX15Q9BXT5 2789 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 A0A1B0GWA3 101 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 SYT5O00445 386 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms