RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 GKN3PP0CG01 181 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 LIPCP11150 499 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 DRD2P14416 443 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 MAGEB1P43366 347 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 SIM1P81133 766 aaPredicted RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 ETFDHQ16134 617 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 SLC36A2Q495M3 483 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 ZCCHC12Q6PEW1 402 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 OR52N1Q8NH53 320 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 SP7Q8TDD2 431 aaPredicted RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 CAMK1GQ96NX5 476 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 OR1F2PQ96R84 312 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 USB1Q9BQ65 265 aaKnown RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 SOSTQ9BQB4 213 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 OR52D1Q9H346 318 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 HRASLSQ9HDD0 168 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 PRSS16Q9NQE7 514 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 NTMQ9P121 344 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 FBXL3Q9UKT7 428 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 ZNF175Q9Y473 711 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 KCNE3Q9Y6H6 103 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 ECDO95905 644 aaPredicted RBP8.93□□□□□ -0.98
VCAN-210ENST00000513960 HTR1FP30939 366 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 CCR9P51686 369 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 REEP5Q00765 189 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 HLXQ14774 488 aaPredicted RBP8.93□□□□□ -0.98
VCAN-210ENST00000513960 SWI5Q1ZZU3 235 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 TMEM44Q2T9K0 475 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 EOGTQ5NDL2 527 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 SPRED2Q7Z698 418 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 PAQR7Q86WK9 346 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 SDR16C5Q8N3Y7 309 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 ARIH2OSQ8N7S6 290 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 CLRN3Q8NCR9 226 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 OR4C6Q8NH72 309 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 SUN3Q8TAQ9 357 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 SCARB1Q8WTV0 552 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 THAP4Q8WY91 577 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 SLC41A3Q96GZ6 507 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 CD180Q99467 661 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 PDCD1LG2Q9BQ51 273 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 GPR174Q9BXC1 333 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 POT1Q9NUX5 634 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 CYB5R1Q9UHQ9 305 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 GLS2Q9UI32 602 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 OR1A2Q9Y585 309 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 NPIPA5A0A0B4J1W7 369 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 TRBV2A0A0J9YWF9 115 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 ANTXRLA6NF34 631 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 ZNF98A6NK75 572 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 NPIPA7E9PJI5 369 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 SURF4O15260 269 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 ATG12O94817 140 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 IGF2P01344 180 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 NPIPA8P0DM63 369 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 ACHEP22303 614 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 DCTDP32321 178 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 SEC61A1P61619 476 aaKnown RBP8.93□□□□□ -0.98
VCAN-210ENST00000513960 EIF2B5Q13144 721 aaKnown RBP8.93□□□□□ -0.98
VCAN-210ENST00000513960 GNA13Q14344 377 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 OR4C11Q6IEV9 310 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 RAB12Q6IQ22 244 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 OR5J2Q8NH18 312 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 CPNE2Q96FN4 548 aaPredicted RBP8.93□□□□□ -0.98
VCAN-210ENST00000513960 ASB16Q96NS5 453 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 NPAS1Q99742 590 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 DPH7Q9BTV6 452 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 PITHD1Q9GZP4 211 aaPredicted RBP8.93□□□□□ -0.98
VCAN-210ENST00000513960 EVA1AQ9H8M9 152 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 KLHL9Q9P2J3 617 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 PRELID3BQ9Y3B1 194 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 TRAV27A0A087WT01 109 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 TMPRSS11DO60235 418 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 TBX19O60806 448 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 ARL6IP5O75915 188 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 S100A9P06702 114 aaKnown RBP8.93□□□□□ -0.98
VCAN-210ENST00000513960 CBR1P16152 277 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 RPL4P36578 427 aaKnown RBP8.93□□□□□ -0.98
VCAN-210ENST00000513960 LINC00303Q3SY05 128 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 TMEM240Q5SV17 173 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 SLC6A19Q695T7 634 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 PSRC1Q6PGN9 363 aaPredicted RBP8.93□□□□□ -0.98
VCAN-210ENST00000513960 DGLUCYQ7Z3D6 616 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 YAF2Q8IY57 180 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 RELTQ969Z4 430 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 XKR8Q9H6D3 395 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 ISYNA1Q9NPH2 558 aa8.93□□□□□ -0.98
VCAN-210ENST00000513960 PHPT1Q9NRX4 125 aaPredicted RBP8.93□□□□□ -0.98
VCAN-210ENST00000513960 ACSS1Q9NUB1 689 aaPredicted RBP8.93□□□□□ -0.98
VCAN-210ENST00000513960 TCF20Q9UGU0 1960 aaKnown RBP8.92□□□□□ -0.98
VCAN-210ENST00000513960 FAM171A2A8MVW0 826 aa8.92□□□□□ -0.98
VCAN-210ENST00000513960 KDM4EB2RXH2 506 aaPredicted RBP8.92□□□□□ -0.98
VCAN-210ENST00000513960 ERI3O43414 337 aaKnown RBP8.92□□□□□ -0.98
VCAN-210ENST00000513960 PRICKLE3O43900 615 aaPredicted RBP8.92□□□□□ -0.98
VCAN-210ENST00000513960 LDOC1O95751 146 aaPredicted RBP8.92□□□□□ -0.98
VCAN-210ENST00000513960 PAK4O96013 591 aaPredicted RBP8.92□□□□□ -0.98
VCAN-210ENST00000513960 PPP3CBP16298 524 aa8.92□□□□□ -0.98
VCAN-210ENST00000513960 PTH2RP49190 550 aa8.92□□□□□ -0.98
VCAN-210ENST00000513960 RAP2BP61225 183 aa8.92□□□□□ -0.98
VCAN-210ENST00000513960 NUDT18Q6ZVK8 323 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms