RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 CHRNA9Q9UGM1 479 aa7.36□□□□□ -1.23
NEDD4-210ENST00000513957 A1L4Q6 167 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 FXYD1O00168 92 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 SYT5O00445 386 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 FBP2O00757 339 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 SEC14L5O43304 696 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 GMFGO60234 142 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 CYP7B1O75881 506 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 DCTN3O75935 186 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 TOXO94900 526 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 GOSR1O95249 250 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 SYNGR4O95473 234 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 C1QCP02747 245 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 C8BP07358 591 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 IGFBP2P18065 325 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 DRD4P21917 467 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 TCEA1P23193 301 aaKnown RBP7.35□□□□□ -1.23
NEDD4-210ENST00000513957 SLC7A1P30825 629 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 PCGF2P35227 344 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 SLC1A3P43003 542 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 POLR2HP52434 150 aaKnown RBP7.35□□□□□ -1.23
NEDD4-210ENST00000513957 ZNF136P52737 540 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 SUCLG1P53597 346 aaKnown RBP7.35□□□□□ -1.23
NEDD4-210ENST00000513957 CLDN15P56746 228 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 CLDN20P56880 219 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 PCBP3P57721 371 aaKnown RBP7.35□□□□□ -1.23
NEDD4-210ENST00000513957 RAC3P60763 192 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 COPZ1P61923 177 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 GNGT1P63211 74 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 CSNK2A1P68400 391 aaPredicted RBP7.35□□□□□ -1.23
NEDD4-210ENST00000513957 SORDQ00796 357 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 TFF3Q07654 80 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 MERTKQ12866 999 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 VEZF1Q14119 521 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 PON3Q15166 354 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 RNPS1Q15287 305 aaKnown RBP7.35□□□□□ -1.23
NEDD4-210ENST00000513957 ADRM1Q16186 407 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 ZNF239Q16600 458 aaKnown RBP7.35□□□□□ -1.23
NEDD4-210ENST00000513957 SYT14P1Q58G82 188 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 ZNF311Q5JNZ3 666 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 HBMQ6B0K9 141 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 WBP2NLQ6ICG8 309 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 NANOGP8Q6NSW7 305 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 HACD2Q6Y1H2 254 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 ZNF836Q6ZNA1 936 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 PLEKHM3Q6ZWE6 761 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 PATL1Q86TB9 770 aaKnown RBP7.35□□□□□ -1.23
NEDD4-210ENST00000513957 SNX32Q86XE0 403 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 UBQLNLQ8IYU4 475 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 SLC43A2Q8N370 569 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 C9orf106Q8NAJ2 232 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 SMPDL3BQ92485 455 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 MAL2Q969L2 176 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 REXO5Q96IC2 774 aaKnown RBP7.35□□□□□ -1.23
NEDD4-210ENST00000513957 GMPPAQ96IJ6 420 aaPredicted RBP7.35□□□□□ -1.23
NEDD4-210ENST00000513957 HOPXQ9BPY8 73 aaPredicted RBP7.35□□□□□ -1.23
NEDD4-210ENST00000513957 CCDC106Q9BWC9 280 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 PINK1Q9BXM7 581 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 ENKD1Q9H0I2 346 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 IKZF5Q9H5V7 419 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 IFT22Q9H7X7 185 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 NANOGQ9H9S0 305 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 EFCAB1Q9HAE3 211 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 FANCFQ9NPI8 374 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 KLHL28Q9NXS3 571 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 JKAMPQ9P055 326 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 PACSIN3Q9UKS6 424 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 HDGFL3Q9Y3E1 203 aa7.35□□□□□ -1.23
NEDD4-210ENST00000513957 CLDN24A6NM45 220 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 TNFSF11O14788 317 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 MSTNO14793 375 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 OIP5O43482 229 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 SS18L1O75177 396 aaPredicted RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 DNAJC8O75937 253 aaPredicted RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 PMS2P2O95744 297 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 CD8BP10966 210 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 COX6B1P14854 86 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 BMP5P22003 454 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 IDH2P48735 452 aaKnown RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 SEC24CP53992 1094 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 CARD18P57730 90 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 MTPNP58546 118 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 NCALDP61601 193 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 GUSBP1Q15486 140 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 TOMM34Q15785 309 aaPredicted RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 VMACQ2NL98 169 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 NDUFAF6Q330K2 333 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 FAM91A1Q658Y4 838 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 POMZP3Q6PJE2 187 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 C5orf46Q6UWT4 87 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 LHFPL2Q6ZUX7 228 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 NCCRP1Q6ZVX7 275 aaPredicted RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 CCDC80Q76M96 950 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 NLRC3Q7RTR2 1065 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 OLIG3Q7RTU3 272 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 PIGWQ7Z7B1 504 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 MTDHQ86UE4 582 aaKnown RBP7.34□□□□□ -1.23
NEDD4-210ENST00000513957 VRK2Q86Y07 508 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 KIF18BQ86Y91 864 aa7.34□□□□□ -1.23
NEDD4-210ENST00000513957 ARMC8Q8IUR7 673 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms