RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 ZNF791Q3KP31 576 aaPredicted RBP11.7□□□□□ -0.54
PVT1-203ENST00000513868 ELOA3BQ3SY89 546 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 C3orf38Q5JPI3 329 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 GPR107Q5VW38 600 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 MEDAGQ5VYS4 303 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 BICRALQ6AI39 1079 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 RPL13AP3Q6NVV1 102 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 NDUFAF7Q7L592 441 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 OAFQ86UD1 273 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 SVOPQ8N4V2 548 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 SLC15A4Q8N697 577 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 ELOA3Q8NG57 546 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 OR51A7Q8NH64 312 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 ZNF563Q8TA94 476 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 ISOC1Q96CN7 298 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 NMD3Q96D46 503 aaKnown RBP11.7□□□□□ -0.54
PVT1-203ENST00000513868 TMCO6Q96DC7 493 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 SGTBQ96EQ0 304 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 DOK1Q99704 481 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 CDCA4Q9BXL8 241 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 COL25A1Q9BXS0 654 aaPredicted RBP11.7□□□□□ -0.54
PVT1-203ENST00000513868 YIPF3Q9GZM5 350 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 NAA50Q9GZZ1 169 aaKnown RBP11.7□□□□□ -0.54
PVT1-203ENST00000513868 MED17Q9NVC6 651 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 FARSAQ9Y285 508 aaKnown RBP11.7□□□□□ -0.54
PVT1-203ENST00000513868 HRH3Q9Y5N1 445 aa11.7□□□□□ -0.54
PVT1-203ENST00000513868 C2orf72A6NCS6 295 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 MASP2O00187 686 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 MAN1A2O60476 641 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 HMGN1P05114 100 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 LCKP06239 509 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 FREM3P0C091 2139 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 BMP7P18075 431 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 PGCP20142 388 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 F8A1P23610 371 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 ITPKBP27987 946 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 GRK5P34947 590 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 NBL1P41271 181 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 CBFBQ13951 182 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 TBCEQ15813 527 aaPredicted RBP11.69□□□□□ -0.54
PVT1-203ENST00000513868 NTRK2Q16620 822 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 COL28A1Q2UY09 1125 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 ZNF362Q5T0B9 420 aaPredicted RBP11.69□□□□□ -0.54
PVT1-203ENST00000513868 AADACL4Q5VUY2 407 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 UBE2UQ5VVX9 321 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 CCDC81Q6ZN84 652 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 MISPQ8IVT2 679 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 CACTIN-AS1Q8N1I8 211 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 DEFB124Q8NES8 71 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 ANKK1Q8NFD2 765 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 OR10G3Q8NGC4 313 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 OR52L1Q8NGH7 329 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 B4GALNT2Q8NHY0 566 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 SLC22A8Q8TCC7 542 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 LIPHQ8WWY8 451 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 RORBQ92753 470 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 PRRG3Q9BZD7 231 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 ZNF160Q9HCG1 818 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 GALNT9Q9HCQ5 603 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 MRPS18AQ9NVS2 196 aaKnown RBP11.69□□□□□ -0.54
PVT1-203ENST00000513868 OSGIN1Q9UJX0 560 aa11.69□□□□□ -0.54
PVT1-203ENST00000513868 RPL36Q9Y3U8 105 aaKnown RBP11.69□□□□□ -0.54
PVT1-203ENST00000513868 RIF1Q5UIP0 2472 aaKnown RBP11.69□□□□□ -0.54
PVT1-203ENST00000513868 NSG1A0A0A6YYJ2 146 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 HTR3EA5X5Y0 456 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 ZNF701M0R085 212 aaPredicted RBP11.68□□□□□ -0.54
PVT1-203ENST00000513868 PRODHO43272 600 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 CDC40O60508 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
PVT1-203ENST00000513868 ITGA10O75578 1167 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 OR7A10O76100 309 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 CDK4P11802 303 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 GSTT1P30711 240 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 SOX3P41225 446 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 SLC9A3P48764 834 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 RPS4XP62701 263 aaKnown RBP11.68□□□□□ -0.54
PVT1-203ENST00000513868 FOXK2Q01167 660 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 LTBQ06643 244 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 C17orf67Q0P5P2 114 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 Q0VFX4 171 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 SSPNQ14714 243 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 QPRTQ15274 297 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 TMEM164Q5U3C3 297 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 OR5M10Q6IEU7 315 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 RTL4Q6ZR62 310 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 ARMC10Q8N2F6 343 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 STX19Q8N4C7 294 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 ZNF420Q8TAQ5 688 aaPredicted RBP11.68□□□□□ -0.54
PVT1-203ENST00000513868 SPACA9Q96E40 222 aaPredicted RBP11.68□□□□□ -0.54
PVT1-203ENST00000513868 PRRX2Q99811 253 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 CXorf56Q9H5V9 222 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 HINT3Q9NQE9 182 aaKnown RBP11.68□□□□□ -0.54
PVT1-203ENST00000513868 TAS2R16Q9NYV7 291 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 CNOT1A5YKK6 2376 aaKnown RBP11.68□□□□□ -0.54
PVT1-203ENST00000513868 FREM2Q5SZK8 3169 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 NUDT14O95848 222 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 PTHP01270 115 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 PCSK6P29122 969 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 OTX2P32243 289 aa11.68□□□□□ -0.54
PVT1-203ENST00000513868 TMED10P49755 219 aaKnown RBP11.68□□□□□ -0.54
PVT1-203ENST00000513868 ST13P50502 369 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms