RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	ZNF649	Q9BS31	505 aa		10.34	□□□□□ -0.75
PDCD6-210	ENST00000513582	JAM3	Q9BX67	310 aa		10.34	□□□□□ -0.75
PDCD6-210	ENST00000513582	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.34	□□□□□ -0.75
PDCD6-210	ENST00000513582	PIGM	Q9H3S5	423 aa		10.34	□□□□□ -0.75
PDCD6-210	ENST00000513582	HCFC1R1	Q9NWW0	138 aa		10.34	□□□□□ -0.75
PDCD6-210	ENST00000513582	MBD1	Q9UIS9	605 aa	Predicted RBP	10.34	□□□□□ -0.75
PDCD6-210	ENST00000513582	TET1	Q8NFU7	2136 aa		10.34	□□□□□ -0.75
PDCD6-210	ENST00000513582	DAPL1	A0PJW8	107 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	GAPDHS	O14556	408 aa	Predicted RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	PFN3	P60673	137 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	NTHL1	P78549	312 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	RING1	Q06587	406 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	ECH1	Q13011	328 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	CYB5R2	Q6BCY4	276 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	CD300LG	Q6UXG3	332 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	TPRA1	Q86W33	373 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	LINC01599	Q8WXQ3	324 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	ARSG	Q96EG1	525 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	ZNF354B	Q96LW1	612 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	CPEB1	Q9BZB8	566 aa	Known RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	SLC38A1	Q9H2H9	487 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	CXorf36	Q9H7Y0	433 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	TAS2R10	Q9NYW0	307 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	MYOF	Q9NZM1	2061 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	TMEM202	A6NGA9	273 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	KDM4E	B2RXH2	506 aa	Predicted RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	FRS3	O43559	492 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	CR2	P20023	1033 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	PRKAR1B	P31321	381 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	SLC6A12	P48065	614 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	GPR143	P51810	404 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	MANF	P55145	182 aa	Known RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	TSSK4	Q6SA08	328 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	MOB3C	Q70IA8	216 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	FAM98A	Q8NCA5	519 aa	Known RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	PAQR8	Q8TEZ7	354 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	SUV39H2	Q9H5I1	410 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	TRIM36	Q9NQ86	728 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	ENTPD4	Q9Y227	616 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	DOCK4	Q8N1I0	1966 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	KANTR	A0A1W2PQU2	76 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	GPR37L1	O60883	481 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	SLC16A8	O95907	504 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	EOMES	O95936	686 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	FBP1	P09467	338 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	UBB	P0CG47	229 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	UBC	P0CG48	685 aa	Known RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	C8orf89	P0DMQ9	161 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	STAT5A	P42229	794 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	SMIM11A	P58511	58 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	RPS27A	P62979	156 aa	Known RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	UBA52	P62987	128 aa	Known RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	SLBP	Q14493	270 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	PEA15	Q15121	130 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	TGIF1	Q15583	401 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	LRRTM1	Q86UE6	522 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	TMEM25	Q86YD3	366 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	NPAS4	Q8IUM7	802 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR2AP1	Q8NGE2	309 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR6T1	Q8NGN1	323 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	CLP1	Q92989	425 aa	Known RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	VOPP1	Q96AW1	172 aa		10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	TRMT2B	Q96GJ1	504 aa	Known RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	TRMT61B	Q9BVS5	477 aa	Known RBP	10.33	□□□□□ -0.76
PDCD6-210	ENST00000513582	USP34	Q70CQ2	3546 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	OTOF	Q9HC10	1997 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	TMEM82	A0PJX8	343 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR14I1	A6ND48	311 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	C5orf52	A6NGY3	159 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	DRGX	A6NNA5	263 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	MAGEB4	O15481	346 aa	Predicted RBP	10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	FADS1	O60427	444 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	ADAMTS4	O75173	837 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	SC5D	O75845	299 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	KRT33A	O76009	404 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	NQO2	P16083	231 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	GPR1	P46091	355 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	PPIA	P62937	165 aa	Known RBP	10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	ZNF763	Q0D2J5	394 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	IRF5	Q13568	498 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	SYPL1	Q16563	259 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	COMMD6	Q7Z4G1	85 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	THOC6	Q86W42	341 aa	Known RBP	10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	MUC20	Q8N307	709 aa	Predicted RBP	10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	ACBD7	Q8N6N7	88 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	ZNF740	Q8NDX6	193 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR4Q3	Q8NH05	313 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	HAVCR2	Q8TDQ0	301 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	CA5BP1	Q8WTZ4	195 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	C14orf79	Q96F83	325 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	NRTN	Q99748	197 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	ACTL6A	O96019	429 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	ATP1B1	P05026	303 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	EPX	P11678	715 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	PDHA2	P29803	388 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	GPR4	P46093	362 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	C4orf46	Q504U0	113 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	AGTRAP	Q6RW13	159 aa		10.32	□□□□□ -0.76
PDCD6-210	ENST00000513582	UNQ6126/PRO20091	Q6UXV3	157 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms