RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 IGLV3-10A0A075B6K4 115 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 IGLV4-3A0A075B6K6 122 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 A0A087X0T9 212 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 MACROD2A1Z1Q3 448 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 ZSCAN5CA6NGD5 496 aaPredicted RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 NTN3O00634 580 aaPredicted RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 ALOX15BO15296 676 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 SSX5O60225 188 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 ZMPSTE24O75844 475 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 ZFAND5O76080 213 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 NXPH4O95158 308 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 PCCBP05166 539 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 FAM228BP0C875 321 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 ALPPL2P10696 532 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 GPX3P22352 226 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 HNRNPA2B1P22626 353 aaKnown RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 DRD3P35462 400 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 MAGEA1P43355 309 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 ZFP36L2P47974 494 aaKnown RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 HNRNPFP52597 415 aaKnown RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 AIF1P55008 147 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 NDUFV3P56181 108 aaKnown RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 MAXP61244 160 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 DYNLT1P63172 113 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 DNAJC3Q13217 504 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 NFATC2Q13469 925 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 GK2Q14410 553 aaPredicted RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 ZNF235Q14590 738 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 MEF2DQ14814 521 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 SPA17Q15506 151 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 OR1C1Q15619 314 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 WSCD2Q2TBF2 565 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 PARP15Q460N3 678 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 CMPK2Q5EBM0 449 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 MARC1Q5VT66 337 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 SPECC1LQ69YQ0 1117 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 RAB12Q6IQ22 244 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 NEK5Q6P3R8 708 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 APTXQ7Z2E3 356 aaKnown RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 TAF8Q7Z7C8 310 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 HORMAD1Q86X24 394 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 CCDC50Q8IVM0 306 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 ZNF683Q8IZ20 524 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 SFRP1Q8N474 314 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 GVQW1Q8N7I0 195 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 OR2L2Q8NH16 312 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 ZNF564Q8TBZ8 553 aaPredicted RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 LMX1AQ8TE12 382 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 RASL10AQ92737 203 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 NTAN1Q96AB6 310 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 ISG20Q96AZ6 181 aaKnown RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 RUNDC3BQ96NL0 473 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 RAB40CQ96S21 281 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 CHP1Q99653 195 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 RBM4BQ9BQ04 359 aaKnown RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 NHEJ1Q9H9Q4 299 aaPredicted RBP3.48□□□□□ -1.85
HTT-210ENST00000512909 NT5MQ9NPB1 228 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 PNPLA3Q9NST1 481 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 THYN1Q9P016 225 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 SEC14L4Q9UDX3 406 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 IL19Q9UHD0 177 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 KLK13Q9UKR3 277 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 HS3ST2Q9Y278 367 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 HYOU1Q9Y4L1 999 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 HEY1Q9Y5J3 304 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 NUP210Q8TEM1 1887 aaPredicted RBP3.47□□□□□ -1.85
HTT-210ENST00000512909 MYH10P35580 1976 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 ATG2BQ96BY7 2078 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 ZFHX2Q9C0A1 2572 aaPredicted RBP3.47□□□□□ -1.85
HTT-210ENST00000512909 RNF103-CHMP3A0A140T963 221 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 A0A1B0GTH9 108 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 A0A1B0GTQ1 180 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 LOC390937A0A1W2PQ73 354 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 TRABD2BA6NFA1 517 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 SOCS3O14543 225 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 RAD51BO15315 384 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 TLX2O43763 284 aaPredicted RBP3.47□□□□□ -1.85
HTT-210ENST00000512909 SPOPO43791 374 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 TRIM16O95361 564 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 CD160O95971 181 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 TNFP01375 233 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 JCHAINP01591 159 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 IGLV3-19P01714 112 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 SLC4A1P02730 911 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 GYPCP04921 128 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 KRT7P08729 469 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 NUDT1P36639 197 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 RABIFP47224 123 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 HCAR3P49019 387 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 DUSP3P51452 185 aaPredicted RBP3.47□□□□□ -1.85
HTT-210ENST00000512909 CLDN6P56747 220 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 KRTAP10-9P60411 292 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 SRP54P61011 504 aaKnown RBP3.47□□□□□ -1.85
HTT-210ENST00000512909 SLC10A7Q0GE19 358 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 ELP6Q0PNE2 266 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 PDK2Q15119 407 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 P2RY14Q15391 338 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 CDKN3Q16667 212 aa3.47□□□□□ -1.85
HTT-210ENST00000512909 DEFB133Q30KQ1 61 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms