RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ZCCHC4Q9H5U6 513 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 CNTD2Q9H8S5 307 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 SIRT3Q9NTG7 399 aaPredicted RBP6.38□□□□□ -1.39
USP46-208ENST00000512656 FBXO34Q9NWN3 711 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 ERVK13-1Q9NX77 482 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 MKS1Q9NXB0 559 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 KLHL9Q9P2J3 617 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 LAMP3Q9UQV4 416 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 CARD8Q9Y2G2 431 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 DTNAQ9Y4J8 743 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 PCNX3Q9H6A9 2034 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 A0A1W2PP18 115 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 TLDC2A0PJX2 215 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 INAFM1C9JVW0 142 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 CFLARO15519 480 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 ZNF264O43296 627 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 PEX11AO75192 247 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 GCM2O75603 506 aaPredicted RBP6.37□□□□□ -1.39
USP46-208ENST00000512656 AGR2O95994 175 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 ADAP00813 363 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 TP53P04637 393 aaPredicted RBP6.37□□□□□ -1.39
USP46-208ENST00000512656 UBL4AP11441 157 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 PRKCAP17252 672 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 ENPP1P22413 925 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 ALDH3A1P30838 453 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 CCR4P51679 360 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 ZNF844Q08AG5 666 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 RASGEF1BQ0VAM2 473 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 CBFBQ13951 182 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 VEZF1Q14119 521 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 TAB1Q15750 504 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 CLEC12BQ2HXU8 276 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 UGT3A2Q3SY77 523 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 ANKRD39Q53RE8 183 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 XKR7Q5GH72 579 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 SLC25A53Q5H9E4 307 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 C6orf136Q5SQH8 315 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 NCMAPQ5T1S8 102 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 C3orf33Q6P1S2 294 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 CBLN3Q6UW01 205 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 Q6ZT83 130 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 BHLHA15Q7RTS1 189 aaPredicted RBP6.37□□□□□ -1.39
USP46-208ENST00000512656 NUFIP2Q7Z417 695 aaKnown RBP6.37□□□□□ -1.39
USP46-208ENST00000512656 P2RY8Q86VZ1 359 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 GSPT2Q8IYD1 628 aaKnown RBP6.37□□□□□ -1.39
USP46-208ENST00000512656 ZNF614Q8N883 585 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 BANPQ8N9N5 519 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 FNDC5Q8NAU1 212 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 ATP6V1C2Q8NEY4 427 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 OR5W2Q8NH69 310 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 RFWD2Q8NHY2 731 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 GPR119Q8TDV5 335 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 SMAP2Q8WU79 429 aaPredicted RBP6.37□□□□□ -1.39
USP46-208ENST00000512656 TMEM234Q8WY98 164 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 ST8SIA1Q92185 356 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 DACT3Q96B18 629 aaPredicted RBP6.37□□□□□ -1.39
USP46-208ENST00000512656 COQ8BQ96D53 544 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 APOPT1Q96IL0 206 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 C20orf173Q96LM9 149 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 NPAS1Q99742 590 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 SRXN1Q9BYN0 137 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 NMUR2Q9GZQ4 415 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 C12orf65Q9H3J6 166 aaKnown RBP6.37□□□□□ -1.39
USP46-208ENST00000512656 CXorf36Q9H7Y0 433 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 BARX1Q9HBU1 254 aaPredicted RBP6.37□□□□□ -1.39
USP46-208ENST00000512656 SERINC1Q9NRX5 453 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 EXD2Q9NVH0 621 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 FAIMQ9NVQ4 179 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 GFOD1Q9NXC2 390 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 EMC3Q9P0I2 261 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 ICAM5Q9UMF0 924 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 PCDHGB4Q9UN71 923 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 FBN1P35555 2871 aaKnown RBP6.37□□□□□ -1.39
USP46-208ENST00000512656 NBEAL1Q6ZS30 2694 aa6.37□□□□□ -1.39
USP46-208ENST00000512656 CADP27708 2225 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 PRR14LQ5THK1 2151 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 NPIPA5A0A0B4J1W7 369 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 SERINC4A6NH21 518 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 ZNF724A8MTY0 619 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 TMEM233B4DJY2 109 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 NPIPA7E9PJI5 369 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 NPIPB9F8W1W9 429 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 OVOL3O00110 214 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 EFNA2O43921 213 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 STX11O75558 287 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 CYP7B1O75881 506 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 SLU7O95391 586 aaKnown RBP6.36□□□□□ -1.39
USP46-208ENST00000512656 NTN1O95631 604 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 C6orf47O95873 294 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 CHRNGP07510 517 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 NPIPA8P0DM63 369 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 PGCP20142 388 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 FKBP2P26885 142 aaKnown RBP6.36□□□□□ -1.39
USP46-208ENST00000512656 SHC1P29353 583 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 SOAT1P35610 550 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 OR3A2P47893 321 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 CSNK2A1P68400 391 aaPredicted RBP6.36□□□□□ -1.39
USP46-208ENST00000512656 DMTNQ08495 405 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 IFFO1Q0D2I5 559 aa6.36□□□□□ -1.39
USP46-208ENST00000512656 TNK1Q13470 666 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms