RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 UBASH3BQ8TF42 649 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 SUCNR1Q9BXA5 334 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 SERINC1Q9NRX5 453 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 PARPBPQ9NWS1 579 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 UPB1Q9UBR1 384 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 CARD8Q9Y2G2 431 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 SERTM1A2A2V5 107 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 ZNF716A6NP11 495 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 GTPBP1O00178 669 aaKnown RBP10.05□□□□□ -0.8
RNF4-216ENST00000511859 CRYAAP02489 173 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 ALOX5P09917 674 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 ACP2P11117 423 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 NTF4P34130 210 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 GPC1P35052 558 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 SLC16A1P53985 500 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 CLCQ05315 142 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 CCNIQ14094 377 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 TRIP10Q15642 601 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 ADIPOQQ15848 244 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 DUSP5Q16690 384 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 TSNAXIP1Q2TAA8 658 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 KLHL24Q6TFL4 600 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 ZNF551Q7Z340 670 aaPredicted RBP10.05□□□□□ -0.8
RNF4-216ENST00000511859 CROCCP2Q86T23 111 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 COX18Q8N8Q8 333 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 OR52E4Q8NGH9 312 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 CDC26Q8NHZ8 85 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 FAM76AQ8TAV0 307 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 ZHX1-C8orf76Q96EF9 292 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 GIMAP5Q96F15 307 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 BOD1Q96IK1 185 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 OBP2BQ9NPH6 170 aa10.05□□□□□ -0.8
RNF4-216ENST00000511859 EIF4E2O60573 245 aaKnown RBP10.04□□□□□ -0.8
RNF4-216ENST00000511859 GLRA3O75311 464 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 H6PDO95479 791 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 MSMBP08118 114 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 HKR1P10072 659 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 SLC1A3P43003 542 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 CCT5P48643 541 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 MAGOHP61326 146 aaKnown RBP10.04□□□□□ -0.8
RNF4-216ENST00000511859 POU6F2P78424 691 aaPredicted RBP10.04□□□□□ -0.8
RNF4-216ENST00000511859 SLC25A3Q00325 362 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 HSPB3Q12988 150 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 CBFBQ13951 182 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 OCLNQ16625 522 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 TTMPQ5BVD1 217 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 SPDYAQ5MJ70 313 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 HIST2H2BDQ6DRA6 164 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 FAHD2BQ6P2I3 314 aaPredicted RBP10.04□□□□□ -0.8
RNF4-216ENST00000511859 THSD4Q6ZMP0 1018 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 GOLGA6L1Q8N7Z2 621 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 CCDC63Q8NA47 563 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 OR5W2Q8NH69 310 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 PIGXQ8TBF5 258 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 FAHD2AQ96GK7 314 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 APOPT1Q96IL0 206 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 MS4A4EQ96PG1 132 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 LRRC37BQ96QE4 947 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 DOK1Q99704 481 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 MRPL57Q9BQC6 102 aaKnown RBP10.04□□□□□ -0.8
RNF4-216ENST00000511859 KATNB1Q9BVA0 655 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 BTBD2Q9BX70 525 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 VIPAS39Q9H9C1 493 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 KCNK9Q9NPC2 374 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 SLC17A7Q9P2U7 560 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 DCDC2Q9UHG0 476 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 EMCNQ9ULC0 261 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 NBEAL2Q6ZNJ1 2754 aa10.04□□□□□ -0.8
RNF4-216ENST00000511859 DYNC1I1O14576 645 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 OIP5O43482 229 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 DNPH1O43598 174 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 BCL10O95999 233 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 PNPP00491 289 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 GSTA1P08263 222 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 SBK3P0C264 359 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 ATP6V1C1P21283 382 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 FKBP2P26885 142 aaKnown RBP10.03□□□□□ -0.8
RNF4-216ENST00000511859 MPGP29372 298 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 CRHR1P34998 444 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 QPRTQ15274 297 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 C3orf36Q3SXR2 165 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 TIGD2Q4W5G0 525 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 SYT14P1Q58G82 188 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 TNFAIP8L3Q5GJ75 292 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 CCNJQ5T5M9 372 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 C9orf135Q5VTT2 229 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 GPRIN3Q6ZVF9 776 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 OR4F15Q8NGB8 312 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 OR51F2Q8NH61 342 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 ZFP28Q8NHY6 868 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 SLC25A43Q8WUT9 341 aaPredicted RBP10.03□□□□□ -0.8
RNF4-216ENST00000511859 ST8SIA1Q92185 356 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 ZNF524Q96C55 264 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 SLC38A2Q96QD8 506 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 ZNF382Q96SR6 550 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 STACQ99469 402 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 MRPL46Q9H2W6 279 aaKnown RBP10.03□□□□□ -0.8
RNF4-216ENST00000511859 DUSP22Q9NRW4 184 aa10.03□□□□□ -0.8
RNF4-216ENST00000511859 DDX28Q9NUL7 540 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms