RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 RIMS3Q9UJD0 308 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 ZNF835Q9Y2P0 537 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 COL6A6A6NMZ7 2263 aa18.11■□□□□ 0.49
USP53-203ENST00000507597 A0A087WUJ7 227 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 TCRBV5S2A0A599 114 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 HTR3EA5X5Y0 456 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 SHISA8B8ZZ34 492 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 SEC14L5O43304 696 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 OR2T1O43869 369 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 C1QL1O75973 258 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 NPTX1Q15818 432 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 TMEM176BQ3YBM2 270 aaPredicted RBP18.1■□□□□ 0.49
USP53-203ENST00000507597 SYT14P1Q58G82 188 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 Q6ZPB1 254 aaPredicted RBP18.1■□□□□ 0.49
USP53-203ENST00000507597 RRM2BQ7LG56 351 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 PIWIL3Q7Z3Z3 882 aaKnown RBP18.1■□□□□ 0.49
USP53-203ENST00000507597 RBM45Q8IUH3 476 aaKnown RBP18.1■□□□□ 0.49
USP53-203ENST00000507597 OR4D11Q8NGI4 311 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 PHF10Q8WUB8 498 aaKnown RBP18.1■□□□□ 0.49
USP53-203ENST00000507597 WDYHV1Q96HA8 205 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 ANKRD19PQ9H560 264 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 AURKCQ9UQB9 309 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 ATRXP46100 2492 aa18.1■□□□□ 0.49
USP53-203ENST00000507597 EIF1AYO14602 144 aaKnown RBP18.09■□□□□ 0.49
USP53-203ENST00000507597 TPST2O60704 377 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 CCNA2P20248 432 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 SFTPDP35247 375 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 RBM34P42696 430 aaKnown RBP18.09■□□□□ 0.49
USP53-203ENST00000507597 STARP49675 285 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 CDH12P55289 794 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 CARD18P57730 90 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 FOXK1P85037 733 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 SRYQ05066 204 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 PIN1Q13526 163 aaPredicted RBP18.09■□□□□ 0.49
USP53-203ENST00000507597 MFSD13AQ14CX5 517 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 TRAM2Q15035 370 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 TMEM211Q6ICI0 200 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 ZNF585AQ6P3V2 769 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 UBQLNLQ8IYU4 475 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 OFCC1Q8IZS5 231 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 PIK3C3Q8NEB9 887 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 OR2V1Q8NHB1 315 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 C7orf34Q96L11 122 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 OR5B2Q96R09 309 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 KLHDC3Q9BQ90 382 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 TMEM43Q9BTV4 400 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 TAPBPLQ9BX59 468 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 SLC19A3Q9BZV2 496 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 KLHL4Q9C0H6 718 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 KRCC1Q9NPI7 259 aaPredicted RBP18.09■□□□□ 0.49
USP53-203ENST00000507597 MCTS1Q9ULC4 181 aaKnown RBP18.09■□□□□ 0.49
USP53-203ENST00000507597 SLC7A7Q9UM01 511 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 TRAPPC4Q9Y296 219 aa18.09■□□□□ 0.49
USP53-203ENST00000507597 BOD1L1Q8NFC6 3051 aa18.08■□□□□ 0.49
USP53-203ENST00000507597 TCRBV3S1A0A5B6 114 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 ADAMDEC1O15204 470 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 DNPH1O43598 174 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 KRT36O76013 467 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 AHSA1O95433 338 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 SYNGR4O95473 234 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 CLDN18P56856 261 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 GK3PQ14409 553 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 HBMQ6B0K9 141 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 GTF2IRD2BQ6EKJ0 949 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 GDF7Q7Z4P5 450 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 GTF2IRD2Q86UP8 949 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 CD163Q86VB7 1156 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 CPNE4Q96A23 557 aaPredicted RBP18.08■□□□□ 0.48
USP53-203ENST00000507597 PIP5K1AQ99755 562 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 WFDC6Q9BQY6 131 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 PRR14Q9BWN1 585 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 PRRG4Q9BZD6 226 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 TMEM185BQ9H7F4 350 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 NDUFAF4Q9P032 175 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 A4GNTQ9UNA3 340 aa18.08■□□□□ 0.48
USP53-203ENST00000507597 A0A1B0GUH1 482 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 TMEM72A0PK05 275 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 hCG_2039718K7EN88 272 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 SULT2B1O00204 365 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 EIF1BO60739 113 aaKnown RBP18.07■□□□□ 0.48
USP53-203ENST00000507597 SEMG1P04279 462 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 H1F0P07305 194 aaKnown RBP18.07■□□□□ 0.48
USP53-203ENST00000507597 GTF2E2P29084 291 aaKnown RBP18.07■□□□□ 0.48
USP53-203ENST00000507597 IDUAP35475 653 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 EIF1AXP47813 144 aaKnown RBP18.07■□□□□ 0.48
USP53-203ENST00000507597 RAC3P60763 192 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 VLDLRP98155 873 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 MTFR2Q6P444 385 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 TMPPEQ6ZT21 453 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 CDK20Q8IZL9 346 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 RNF113BQ8IZP6 322 aaKnown RBP18.07■□□□□ 0.48
USP53-203ENST00000507597 FAM86B1Q8N7N1 296 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 OR5M9Q8NGP3 310 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 OR6S1Q8NH40 331 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 CANT1Q8WVQ1 401 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 OSTF1Q92882 214 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 NPAS1Q99742 590 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 CALHM2Q9HA72 323 aa18.07■□□□□ 0.48
USP53-203ENST00000507597 HEATR5AQ86XA9 2040 aa18.06■□□□□ 0.48
USP53-203ENST00000507597 TRGV8A0A0C4DH27 118 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms