RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 HTR3AP46098 478 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 KCNJ5P48544 419 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 GSK3BP49841 420 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 KRT72Q14CN4 511 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 SGCBQ16585 318 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 SYT14P1Q58G82 188 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 RELL2Q8NC24 303 aaPredicted RBP16.29■□□□□ 0.2
NPHP4-210ENST00000506941 BHLHE22Q8NFJ8 381 aaPredicted RBP16.29■□□□□ 0.2
NPHP4-210ENST00000506941 BCAS4Q8TDM0 211 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 OSTF1Q92882 214 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 C3orf49Q96BT1 292 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 INTS12Q96CB8 462 aaKnown RBP16.29■□□□□ 0.2
NPHP4-210ENST00000506941 OR5B2Q96R09 309 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 ARHGDIGQ99819 225 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 SERINC1Q9NRX5 453 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 AP3M1Q9Y2T2 418 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 TMEM229AB2RXF0 380 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 M0R3H8 397 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 SYT5O00445 386 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 TPST2O60704 377 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 LGI1O95970 557 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 TMIGD3P0DMS9 266 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-210ENST00000506941 SLC7A1P30825 629 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 AGFG1P52594 562 aaKnown RBP16.28■□□□□ 0.2
NPHP4-210ENST00000506941 CARD18P57730 90 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 RGS8P57771 180 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-210ENST00000506941 TFF3Q07654 80 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 ZNF239Q16600 458 aaKnown RBP16.28■□□□□ 0.2
NPHP4-210ENST00000506941 NRF1Q16656 503 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 HIST2H2BCQ6DN03 193 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 P4HA3Q7Z4N8 544 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 OR4D11Q8NGI4 311 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 SLC25A43Q8WUT9 341 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-210ENST00000506941 DNAJA3Q96EY1 480 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 ARL5BQ96KC2 179 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 ALG2Q9H553 416 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 RNF122Q9H9V4 155 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 PAQR5Q9NXK6 330 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-210ENST00000506941 TMEM181Q9P2C4 612 aa16.28■□□□□ 0.2
NPHP4-210ENST00000506941 KLF2Q9Y5W3 355 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-210ENST00000506941 ZC3H12DA2A288 527 aaKnown RBP16.27■□□□□ 0.2
NPHP4-210ENST00000506941 C19orf84I3L1E1 186 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 FESP07332 822 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 C8BP07358 591 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 KLK2P20151 261 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 BMP5P22003 454 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 CTSSP25774 331 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 COL8A1P27658 744 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 HTR1EP28566 365 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 COPZ1P61923 177 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 SLC25A3Q00325 362 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 NPTX1Q15818 432 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 PDSS1Q5T2R2 415 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 PPP4R4Q6NUP7 873 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 ZFP3Q96NJ6 502 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 SPAG4Q9NPE6 437 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 KLHL28Q9NXS3 571 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 SLC13A4Q9UKG4 626 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 PRDM4Q9UKN5 801 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 PACSIN3Q9UKS6 424 aa16.27■□□□□ 0.2
NPHP4-210ENST00000506941 MCTS1Q9ULC4 181 aaKnown RBP16.27■□□□□ 0.2
NPHP4-210ENST00000506941 SPIN1Q9Y657 262 aaPredicted RBP16.27■□□□□ 0.2
NPHP4-210ENST00000506941 PKDREJQ9NTG1 2253 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 A0A1B0GWA3 101 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 A0A1W2PNV4 684 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 PRSS44E7EML9 344 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 TNFSF13O75888 250 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 SYNGR4O95473 234 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 TFPIP10646 304 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 KDELR2P33947 212 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 DIO1P49895 249 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 BNIP2Q12982 314 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 MYBPHQ13203 477 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 GUSBP1Q15486 140 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 LRRC23Q53EV4 343 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-210ENST00000506941 ATG4DQ86TL0 474 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-210ENST00000506941 RBM45Q8IUH3 476 aaKnown RBP16.26■□□□□ 0.19
NPHP4-210ENST00000506941 PGAM4Q8N0Y7 254 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 LSMEM1Q8N8F7 131 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 OR52E4Q8NGH9 312 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 OR6T1Q8NGN1 323 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 SLC26A7Q8TE54 656 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 ROBO4Q8WZ75 1007 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 CPNE4Q96A23 557 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-210ENST00000506941 ZNF559Q9BR84 538 aa16.26■□□□□ 0.19
NPHP4-210ENST00000506941 ZNF629Q9UEG4 869 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-210ENST00000506941 TESQ9UGI8 421 aaKnown RBP16.26■□□□□ 0.19
NPHP4-210ENST00000506941 IGHV3-15A0A0B4J1V0 119 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 CXCR6O00574 342 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 DVL2O14641 736 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 ZNF208O43345 1280 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 IL18BPO95998 194 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 T-ENOLP0DO92 83 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 FCGR2AP12318 317 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 TNFRSF1BP20333 461 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 CXCR1P25024 350 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 CPOXP36551 454 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 RAC3P60763 192 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 SLC25A35Q3KQZ1 300 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 CYBRD1Q53TN4 286 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms