RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 SELENOIQ9C0D9 397 aa1.79□□□□□ -2.12
GYPB-207ENST00000506679 RWDD1Q9H446 243 aaPredicted RBP1.79□□□□□ -2.12
GYPB-207ENST00000506679 AIG1Q9NVV5 245 aa1.79□□□□□ -2.12
GYPB-207ENST00000506679 HPF1Q9NWY4 346 aa1.79□□□□□ -2.12
GYPB-207ENST00000506679 SMPD3Q9NY59 655 aaPredicted RBP1.79□□□□□ -2.12
GYPB-207ENST00000506679 PHF11Q9UIL8 331 aa1.79□□□□□ -2.12
GYPB-207ENST00000506679 ZNF225Q9UK10 706 aa1.79□□□□□ -2.12
GYPB-207ENST00000506679 AK6Q9Y3D8 172 aaKnown RBP1.79□□□□□ -2.12
GYPB-207ENST00000506679 COL4A4P53420 1690 aaPredicted RBP1.79□□□□□ -2.12
GYPB-207ENST00000506679 KDRP35968 1356 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 RSPH10B2B2RC85 870 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 TPST2O60704 377 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 BCAS1O75363 584 aaPredicted RBP1.78□□□□□ -2.12
GYPB-207ENST00000506679 IFNB1P01574 187 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 LGALS2P05162 132 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 RSPH10BP0C881 870 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 PAX7P23759 505 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 COX7A1P24310 79 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 MMP11P24347 488 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 P2RY1P47900 373 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 RIPK1Q13546 671 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 SELPLGQ14242 412 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 TATDN3Q17R31 274 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 CCDC57Q2TAC2 916 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 NSUN5P1Q3KNT7 163 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 SLC25A52Q3SY17 297 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 C1orf100Q5SVJ3 147 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 COX15Q7KZN9 410 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 ACOT1Q86TX2 421 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 RDH10Q8IZV5 341 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 C6orf223Q8N319 242 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 OR2L13Q8N349 312 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 FAM71E2Q8N5Q1 922 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 BRSK1Q8TDC3 778 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 UCN3Q969E3 161 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 C7orf34Q96L11 122 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 AMDHD1Q96NU7 426 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 NRIP2Q9BQI9 281 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 THUMPD2Q9BTF0 503 aaKnown RBP1.78□□□□□ -2.12
GYPB-207ENST00000506679 NXF5Q9H1B4 397 aaKnown RBP1.78□□□□□ -2.12
GYPB-207ENST00000506679 C20orf85Q9H1P6 137 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 SLC25A22Q9H936 323 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 C6orf203Q9P0P8 240 aaPredicted RBP1.78□□□□□ -2.12
GYPB-207ENST00000506679 CHRNA9Q9UGM1 479 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 RAB26Q9ULW5 256 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 TP53TG5Q9Y2B4 290 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 OR10H1Q9Y4A9 318 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 MAD1L1Q9Y6D9 718 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 NOTCH2Q04721 2471 aa1.78□□□□□ -2.12
GYPB-207ENST00000506679 SH3TC1Q8TE82 1336 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 CLSPNQ9HAW4 1339 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 IGHV1OR21-1A0A087WYE8 117 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 TRBV6-6A0A0A6YYG2 114 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 BICDL2A1A5D9 508 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 GJE1A6NN92 205 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 TRDCB7Z8K6 153 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 DCTN6O00399 190 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 OR10H3O60404 316 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 SMPD2O60906 423 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 B3GALNT1O75752 331 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 ZNF853P0CG23 659 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 RBMY1CP0DJD4 496 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 TOP1P11387 765 aaKnown RBP1.77□□□□□ -2.13
GYPB-207ENST00000506679 NPR2P20594 1047 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 UQCRC2P22695 453 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 YWHABP31946 246 aaKnown RBP1.77□□□□□ -2.13
GYPB-207ENST00000506679 KIR2DS4P43632 304 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 RPS10P46783 165 aaKnown RBP1.77□□□□□ -2.13
GYPB-207ENST00000506679 PPT1P50897 306 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 NUCB2P80303 420 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 GRB7Q14451 532 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 GPNMBQ14956 572 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 TRIM16LQ309B1 348 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 TP53I3Q53FA7 332 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 CCDC92Q53HC0 331 aaPredicted RBP1.77□□□□□ -2.13
GYPB-207ENST00000506679 DNAJC21Q5F1R6 531 aaKnown RBP1.77□□□□□ -2.13
GYPB-207ENST00000506679 ACP7Q6ZNF0 438 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 GDPD3Q7L5L3 318 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 ZSCAN30Q86W11 494 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 MTURNQ8N3F0 131 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 SYT14Q8NB59 555 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 STXBP6Q8NFX7 210 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 OR10G3Q8NGC4 313 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 OR1F12Q8NHA8 337 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 ST8SIA1Q92185 356 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 PELI1Q96FA3 418 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 SH3YL1Q96HL8 342 aaPredicted RBP1.77□□□□□ -2.13
GYPB-207ENST00000506679 OR2M2Q96R28 347 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 HIST1H4GQ99525 98 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 SPATA16Q9BXB7 569 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 POLR2J2Q9GZM3 115 aaKnown RBP1.77□□□□□ -2.13
GYPB-207ENST00000506679 POLR2J3Q9H1A7 115 aaKnown RBP1.77□□□□□ -2.13
GYPB-207ENST00000506679 SUDS3Q9H7L9 328 aaPredicted RBP1.77□□□□□ -2.13
GYPB-207ENST00000506679 LIN28AQ9H9Z2 209 aaKnown RBP1.77□□□□□ -2.13
GYPB-207ENST00000506679 ELOVL3Q9HB03 270 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 SLC35D1Q9NTN3 355 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 TREM2Q9NZC2 230 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 MTRF1LQ9UGC7 380 aaKnown RBP1.77□□□□□ -2.13
GYPB-207ENST00000506679 LAMP5Q9UJQ1 280 aa1.77□□□□□ -2.13
GYPB-207ENST00000506679 KLK12Q9UKR0 248 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms