RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SYAP1Q96A49 352 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 ZNF799Q96GE5 643 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 ZNF285Q96NJ3 590 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 CCNL2Q96S94 520 aaPredicted RBP2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 NXF3Q9H4D5 531 aaKnown RBP2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 IL36GQ9NZH8 169 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 KIF25Q9UIL4 384 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 SH3BGRL2Q9UJC5 107 aa2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 ISY1Q9ULR0 285 aaKnown RBP2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 AK6Q9Y3D8 172 aaKnown RBP2.66□□□□□ -1.98
TOPBP1-204ENST00000505804 IGKV1D-8A0A087WSZ0 117 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 LRP5LA4QPB2 252 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 HELTA6NFD8 242 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 BTN3A3O00478 584 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 TRAF3IP2O43734 574 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 CXCL13O43927 109 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 TPST2O60704 377 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 TBX19O60806 448 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 KIAA0754O94854 1291 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 LGI1O95970 557 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 KRT8P05787 483 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 RPA2P15927 270 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 HNF1AP20823 631 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 ATP6V1B2P21281 511 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 YWHABP31946 246 aaKnown RBP2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 CTRLP40313 264 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 PRPS1P60891 318 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 RPS14P62263 151 aaKnown RBP2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 TGFBR3Q03167 851 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 NSDHLQ15738 373 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 ZNF658BQ4V348 819 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 KLF17Q5JT82 389 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 C10orf120Q5SQS8 335 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 C1orf146Q5VVC0 180 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 SLC25A24Q6NUK1 477 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 SYT10Q6XYQ8 523 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 CLEC4FQ8N1N0 589 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 SUMF2Q8NBJ7 301 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 OR1F12Q8NHA8 337 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 MRPS31Q92665 395 aaKnown RBP2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 RDH5Q92781 318 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 MYDGFQ969H8 173 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 RAB7BQ96AH8 199 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 SLC35E1Q96K37 410 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 NIPSNAP3BQ9BS92 247 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 ALG12Q9BV10 488 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 RAB33BQ9H082 229 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 NUDT15Q9NV35 164 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 AIG1Q9NVV5 245 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 CGNQ9P2M7 1197 aaKnown RBP2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 RASD1Q9Y272 281 aa2.65□□□□□ -1.99
TOPBP1-204ENST00000505804 GFYI3L273 518 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 N4BP1O75113 896 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 NPIPB7O75200 414 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 UGT2B4P06133 528 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 HNRNPA2B1P22626 353 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 MMP11P24347 488 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 PSMA5P28066 241 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 PPT1P50897 306 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 CBX1P83916 185 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 ARFRP1Q13795 201 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 GPRC6AQ5T6X5 926 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 RNF165Q6ZSG1 346 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 GET4Q7L5D6 327 aaPredicted RBP2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 SYT14Q8NB59 555 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 OR4D5Q8NGN0 318 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 NEIL3Q8TAT5 605 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 FAM151AQ8WW52 585 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 TTC25Q96NG3 672 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 MBOAT4Q96T53 435 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 NRTNQ99748 197 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 POLR1EQ9GZS1 481 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 POPDC2Q9HBU9 364 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 RAB18Q9NP72 206 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 MMP26Q9NRE1 261 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 RNF14Q9UBS8 474 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 RPH3ALQ9UNE2 315 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 CACNG2Q9Y698 323 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 V9GY05 133 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 KIF16BQ96L93 1317 aa2.64□□□□□ -1.99
TOPBP1-204ENST00000505804 PLEKHH1Q9ULM0 1364 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 IGHV3OR16-13A0A075B7E8 117 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 IGKV6D-21A0A0A0MT36 114 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 A0A1B0GUA9 196 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 A6NIZ1 184 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 TRDCB7Z8K6 153 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 DCTN6O00399 190 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 PRRG1O14668 218 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 ANGPT2O15123 496 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 TAPBPO15533 448 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 P04436 131 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 LGALS2P05162 132 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 PRG2P13727 222 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 NUDT1P36639 197 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 PTGDSP41222 190 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 TDO2P48775 406 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 KLK7P49862 253 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 RAP1BP61224 184 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 SELENOTP62341 195 aa2.63□□□□□ -1.99
TOPBP1-204ENST00000505804 TMEM123Q8N131 208 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms