RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 RANBP3LQ86VV4 465 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 HDDC3Q8N4P3 179 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 MFSD9Q8NBP5 474 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 FAM98AQ8NCA5 519 aaKnown RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 GALNT11Q8NCW6 608 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 GRHL3Q8TE85 626 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 SEC22CQ9BRL7 303 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 ZNF350Q9GZX5 532 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 CLEC4MQ9H2X3 399 aaPredicted RBP10.97□□□□□ -0.65
UBE3D-206ENST00000505226 HRASLSQ9HDD0 168 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 SPATA2Q9UM82 520 aa10.97□□□□□ -0.65
UBE3D-206ENST00000505226 IDSB3KWA1 339 aa10.96□□□□□ -0.65
UBE3D-206ENST00000505226 OGG1O15527 345 aa10.96□□□□□ -0.65
UBE3D-206ENST00000505226 PEX14O75381 377 aa10.96□□□□□ -0.65
UBE3D-206ENST00000505226 POU3F2P20265 443 aaPredicted RBP10.96□□□□□ -0.65
UBE3D-206ENST00000505226 RAD52P43351 418 aa10.96□□□□□ -0.65
UBE3D-206ENST00000505226 SPRED2Q7Z698 418 aa10.96□□□□□ -0.65
UBE3D-206ENST00000505226 SLC51BQ86UW2 128 aa10.96□□□□□ -0.65
UBE3D-206ENST00000505226 RNF113BQ8IZP6 322 aaKnown RBP10.96□□□□□ -0.65
UBE3D-206ENST00000505226 OR52I2Q8NH67 350 aa10.96□□□□□ -0.65
UBE3D-206ENST00000505226 HDAC8Q9BY41 377 aa10.96□□□□□ -0.65
UBE3D-206ENST00000505226 SPRTNQ9H040 489 aaPredicted RBP10.96□□□□□ -0.65
UBE3D-206ENST00000505226 WDR26Q9H7D7 661 aa10.96□□□□□ -0.65
UBE3D-206ENST00000505226 NPDC1Q9NQX5 325 aaPredicted RBP10.96□□□□□ -0.65
UBE3D-206ENST00000505226 ABRACLQ9P1F3 81 aa10.96□□□□□ -0.65
UBE3D-206ENST00000505226 PRELID1Q9Y255 219 aa10.96□□□□□ -0.65
UBE3D-206ENST00000505226 TP53BP1Q12888 1972 aaPredicted RBP10.96□□□□□ -0.65
UBE3D-206ENST00000505226 A0A1W2PPL8 197 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 FLRT2O43155 660 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 RCBTB2O95199 551 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 UCHL1P09936 223 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 PSMB10P40306 273 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 NAA10P41227 235 aaPredicted RBP10.96□□□□□ -0.66
UBE3D-206ENST00000505226 CLDN12P56749 244 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 TAS2R43P59537 309 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 PITPNAQ00169 270 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 DYRK1AQ13627 763 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 RUNX2Q13950 521 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 KRT33BQ14525 404 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 CDK5R1Q15078 307 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 RPE65Q16518 533 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 TJAP1Q5JTD0 557 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 TCTE1Q5JU00 501 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 HES5Q5TA89 166 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 SLC22A10Q63ZE4 541 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 FIGNL1Q6PIW4 674 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 KIAA1324Q6UXG2 1013 aaKnown RBP10.96□□□□□ -0.66
UBE3D-206ENST00000505226 GPAT4Q86UL3 456 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 SLC25A38Q96DW6 304 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 SMIM19Q96E16 107 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 GSX2Q9BZM3 304 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 FKRPQ9H9S5 495 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 MCCC2Q9HCC0 563 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 POT1Q9NUX5 634 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 FLRT3Q9NZU0 649 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 KHNYNO15037 678 aaKnown RBP10.96□□□□□ -0.66
UBE3D-206ENST00000505226 ADH1CP00326 375 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 THBS1P07996 1170 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 NID1P14543 1247 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 LCN1P31025 176 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 AGBL4Q5VU57 503 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 RAB42Q8N4Z0 105 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 OR4C6Q8NH72 309 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 REG4Q9BYZ8 158 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 ADAP2Q9NPF8 381 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 KRCC1Q9NPI7 259 aaPredicted RBP10.96□□□□□ -0.66
UBE3D-206ENST00000505226 HAO2Q9NYQ3 351 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 DEC1Q9P2X7 70 aa10.96□□□□□ -0.66
UBE3D-206ENST00000505226 PRR19A6NJB7 356 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 RIIAD1A6NNX1 92 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 M0R233 179 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 EML2O95834 649 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 ALDOBP05062 364 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 MAP2K6P52564 334 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 DCST2Q5T1A1 773 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 FHL5Q5TD97 284 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 LINGO2Q7L985 606 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 ZNF619Q8N2I2 560 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 SDR9C7Q8NEX9 313 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 KLHL15Q96M94 604 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 PTCHD1Q96NR3 888 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 SLC25A18Q9H1K4 315 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 TRPV4Q9HBA0 871 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 COPS3Q9UNS2 423 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 SZT2Q5T011 3432 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 TBC1D3EA0A087X179 549 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 CTDSPLO15194 276 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 P2RX6O15547 441 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 CEACAM5P06731 702 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 HOXD4P09016 255 aaPredicted RBP10.95□□□□□ -0.66
UBE3D-206ENST00000505226 CLTBP09497 229 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 WASP42768 502 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 TSPAN5P62079 268 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 SIRPAP78324 504 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 TAGLNQ01995 201 aaKnown RBP10.95□□□□□ -0.66
UBE3D-206ENST00000505226 AMZ1Q400G9 498 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 DEFB134Q4QY38 66 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 HSD17B12Q53GQ0 312 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 NHLRC3Q5JS37 347 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 ADGRG3Q86Y34 549 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms