RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 GSSP48637 474 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 GPR85P60893 370 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 FBXL19-AS1Q494R0 122 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 C1QTNF12Q5T7M4 302 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 RIPPLY2Q5TAB7 128 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 FAHD1Q6P587 224 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 AAGABQ6PD74 315 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 FAM180AQ6UWF9 173 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 CCDC121Q6ZUS5 278 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 RANBP3LQ86VV4 465 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 B3GAT1Q9P2W7 334 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 RIMS3Q9UJD0 308 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 LYVE1Q9Y5Y7 322 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 C2orf72A6NCS6 295 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 IL18BPO95998 194 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 F10P00742 488 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF26P17031 533 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 FXYD6P3P58550 94 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 HIST3H3Q16695 136 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 C1orf94Q6P1W5 598 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 ARHGAP11AQ6P4F7 1023 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 MAMDC2Q7Z304 686 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 CPT1CQ8TCG5 803 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 NSMCE2Q96MF7 247 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 DENND2DQ9H6A0 471 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 MRPL39Q9NYK5 338 aaKnown RBP7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 TMED7-TICAM2A0A0A6YYA0 188 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 SH3PXD2BA1X283 911 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 GNB5O14775 395 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 CASQ2O14958 399 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 CRHP06850 196 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 GKN3PP0CG01 181 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 IDH2P48735 452 aaKnown RBP7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 EFNB1P98172 346 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 OC90Q02509 493 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 MBOAT2Q6ZWT7 520 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF627Q7L945 461 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 IFNEQ86WN2 208 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 DOLPP1Q86YN1 238 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 PM20D2Q8IYS1 436 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 SMYD1Q8NB12 490 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 FIG4Q92562 907 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 HS6ST2Q96MM7 605 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZFP3Q96NJ6 502 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 SRXN1Q9BYN0 137 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 SLC6A15Q9H2J7 730 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 TMED7Q9Y3B3 224 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 A0A0J9YW62 118 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF724A8MTY0 619 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 A8MVM7 634 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 CENPBD1B2RD01 187 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 TOXO94900 526 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 OPN1SWP03999 348 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 CBLP22681 906 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 TFF3Q07654 80 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 C19orf57Q0VDD7 668 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 OR5M3Q8NGP4 307 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 ADAMTS16Q8TE57 1224 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 SLC47A1Q96FL8 570 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 KLHL1Q9NR64 748 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 WDR70Q9NW82 654 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF229Q9UJW7 825 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 SLC9A8Q9Y2E8 581 aa7.43□□□□□ -1.22
CDC42SE2-208ENST00000505065 RCBTB2O95199 551 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 MT-ATP6P00846 226 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF41P51814 821 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 UGT2B15P54855 530 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 RAC3P60763 192 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 SEC23BQ15437 767 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 WIPI1Q5MNZ9 446 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 SZRD1Q7Z422 152 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 ABTB1Q969K4 478 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 NMD3Q96D46 503 aaKnown RBP7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 ARHGAP9Q9BRR9 750 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 OSBPL10Q9BXB5 764 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 AQP7P3A6NL99 342 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 PDLIM1O00151 329 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 KRT36O76013 467 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 GDF1P27539 372 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 TACR3P29371 465 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 GCKP35557 465 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF74Q16587 644 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 WNT2BQ93097 391 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 DDOQ99489 341 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 SF3B5Q9BWJ5 86 aaKnown RBP7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 OR10A4Q9H209 315 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 FKRPQ9H9S5 495 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 MEMO1Q9Y316 297 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 ACACAQ13085 2346 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 GJE1A6NN92 205 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 E9PLN8 166 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 G3V3Y1 287 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 SMAD9O15198 467 aaKnown RBP7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 CYP7B1O75881 506 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 TXNDC12O95881 172 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 FABP3P05413 133 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 UBTFL6P0CB48 400 aaPredicted RBP7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 PLA2G2AP14555 144 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 ITGA2P17301 1181 aa7.42□□□□□ -1.22
CDC42SE2-208ENST00000505065 ST13P50502 369 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms