RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ACSM5Q6NUN0 579 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 MEPCEQ7L2J0 689 aaKnown RBP13.02□□□□□ -0.33
TCOF1-207ENST00000504761 OR5W2Q8NH69 310 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 RHNO1Q9BSD3 238 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 CTSFQ9UBX1 484 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 DHDHQ9UQ10 334 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 AK6Q9Y3D8 172 aaKnown RBP13.02□□□□□ -0.33
TCOF1-207ENST00000504761 A0A1W2PQL4 384 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-207ENST00000504761 SUSD5O60279 629 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF84P51523 738 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 CAV3P56539 151 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 ARHGAP11BQ3KRB8 267 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 ZFP69Q49AA0 526 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 PNLDC1Q8NA58 520 aaKnown RBP13.02□□□□□ -0.33
TCOF1-207ENST00000504761 SETD6Q8TBK2 473 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 SLC22A4Q9H015 551 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 SLC38A1Q9H2H9 487 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 C2orf42Q9NWW7 574 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 COMMD9Q9P000 198 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 DLGAP1O14490 977 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 SMAD9O15198 467 aaKnown RBP13.02□□□□□ -0.33
TCOF1-207ENST00000504761 ORC5O43913 435 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 CYB5AP00167 134 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 C1QCP02747 245 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 GDF1P27539 372 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 MFSD13AQ14CX5 517 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 TBCEQ15813 527 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-207ENST00000504761 SLC18B1Q6NT16 456 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 SLC35D2Q76EJ3 337 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 MS4A15Q8N5U1 240 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF511Q8NB15 262 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 WDR34Q96EX3 536 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 STACQ99469 402 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 NAA11Q9BSU3 229 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-207ENST00000504761 PRDM6Q9NQX0 595 aa13.02□□□□□ -0.33
TCOF1-207ENST00000504761 CNOT2Q9NZN8 540 aaKnown RBP13.02□□□□□ -0.33
TCOF1-207ENST00000504761 LILRB5O75023 590 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 PITPNAQ00169 270 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF227Q86WZ6 799 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 RNF113BQ8IZP6 322 aaKnown RBP13.01□□□□□ -0.33
TCOF1-207ENST00000504761 SIRT6Q8N6T7 355 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 BCORP1Q8N888 145 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 OR5M1Q8NGP8 315 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 S100A16Q96FQ6 103 aaKnown RBP13.01□□□□□ -0.33
TCOF1-207ENST00000504761 DUS3LQ96G46 650 aaKnown RBP13.01□□□□□ -0.33
TCOF1-207ENST00000504761 CHIAQ9BZP6 476 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 HHATLQ9HCP6 504 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 CHMP1AQ9HD42 196 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-207ENST00000504761 LILRA5A6NI73 299 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 AGAP5A6NIR3 686 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 RGS9O75916 674 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-207ENST00000504761 CSTBP04080 98 aaKnown RBP13.01□□□□□ -0.33
TCOF1-207ENST00000504761 FOXK2Q01167 660 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 FCRL6Q6DN72 434 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 VASNQ6EMK4 673 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 GPR137CQ8N3F9 429 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 GALNT6Q8NCL4 622 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF582Q96NG8 517 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF717Q9BY31 904 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-207ENST00000504761 S1PR5Q9H228 398 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 CHST8Q9H2A9 424 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 A0A1W2PPV9 198 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 H0YC42 278 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 FOLR1P15328 257 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 SCGB2B2Q4G0G5 96 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 KLHL26Q53HC5 615 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 HES5Q5TA89 166 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 LACC1Q8IV20 430 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 PGAM5Q96HS1 289 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 Q96M85 177 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 SLC25A18Q9H1K4 315 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF221Q9UK13 617 aa13.01□□□□□ -0.33
TCOF1-207ENST00000504761 EEF1E1O43324 174 aaKnown RBP13□□□□□ -0.33
TCOF1-207ENST00000504761 IGHV4-34P06331 123 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 C4BPBP20851 252 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 MAGEA2P43356 314 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 NXPH1P58417 271 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 EEF1A1P68104 462 aaKnown RBP13□□□□□ -0.33
TCOF1-207ENST00000504761 ARG2P78540 354 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 GLO1Q04760 184 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 FAM199XQ6PEV8 388 aaPredicted RBP13□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF322Q6U7Q0 402 aaPredicted RBP13□□□□□ -0.33
TCOF1-207ENST00000504761 SLITRK4Q8IW52 837 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF100Q8IYN0 542 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 OR8S1Q8NH09 359 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 CCDC74BQ96LY2 380 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 KLHL15Q96M94 604 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 ING4Q9UNL4 249 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 NPFFR2Q9Y5X5 522 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 IGHV1OR21-1A0A087WYE8 117 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 F5H5K5 113 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 SMIM18P0DKX4 95 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 HYAL4Q2M3T9 481 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 ZNF425Q6IV72 752 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 CCDC80Q76M96 950 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 Q8N402 240 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 SREK1IP1Q8N9Q2 155 aaPredicted RBP13□□□□□ -0.33
TCOF1-207ENST00000504761 SLC37A3Q8NCC5 494 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 ZFAND2BQ8WV99 257 aa13□□□□□ -0.33
TCOF1-207ENST00000504761 SYT4Q9H2B2 425 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms