RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 CARM1Q86X55 608 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 LACC1Q8IV20 430 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 CADM2Q8N3J6 435 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 OR4D11Q8NGI4 311 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 PHF10Q8WUB8 498 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 SLC25A43Q8WUT9 341 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 DNAJA4Q8WW22 397 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 SMPDL3BQ92485 455 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 FAM162AQ96A26 154 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 TPD52L3Q96J77 140 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 ADGRG7Q96K78 797 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 KLHL15Q96M94 604 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 TUBA1CQ9BQE3 449 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 THTPAQ9BU02 230 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 MUC13Q9H3R2 512 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 CALHM2Q9HA72 323 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 C12orf10Q9HB07 376 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 TMEM27Q9HBJ8 222 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 DCAF13Q9NV06 445 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 ALKBH4Q9NXW9 302 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 SH3BGRL2Q9UJC5 107 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 RPS6KA6Q9UK32 745 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 SLC5A6Q9Y289 635 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 SH3GLB1Q9Y371 365 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 TMED7Q9Y3B3 224 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 FAM215AQ9Y5M1 114 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 SPIN1Q9Y657 262 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 DOPEY2Q9Y3R5 2298 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 CLEC18AA5D8T8 446 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 H0YC42 278 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 ARPC2O15144 300 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 SEC14L5O43304 696 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 ZNF208O43345 1280 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 DNAJC8O75937 253 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 CXCR1P25024 350 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 SHC1P29353 583 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 SFTPDP35247 375 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 TPD52P55327 224 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 TRIM25Q14258 630 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 OR1Q1Q15612 314 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 NPTX1Q15818 432 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 TMEM176BQ3YBM2 270 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 ACSF3Q4G176 576 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 PDSS1Q5T2R2 415 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 NSUN5P2Q63ZY6 315 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 MTFR2Q6P444 385 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 PGM2L1Q6PCE3 622 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 ZNF613Q6PF04 617 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 ULK3Q6PHR2 472 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 CLEC18BQ6UXF7 455 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 B3GNT6Q6ZMB0 384 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 C3P1Q6ZMU1 363 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 CHMP1BQ7LBR1 199 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 ATG4DQ86TL0 474 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 FJX1Q86VR8 437 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 RBM45Q8IUH3 476 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 UBQLNLQ8IYU4 475 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 CLEC18CQ8NCF0 446 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 VANGL1Q8TAA9 524 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 SLC38A4Q969I6 547 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 C3orf49Q96BT1 292 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 NSMCE2Q96MF7 247 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 MCHR1Q99705 422 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 TTYH2Q9BSA4 534 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 TMEM185BQ9H7F4 350 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 PAQR5Q9NXK6 330 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 ACTR3BQ9P1U1 418 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 RPS6KB2Q9UBS0 482 aa10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 SAMD4AQ9UPU9 718 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 GCN1Q92616 2671 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 USP9XQ93008 2570 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-208ENST00000504489 A0A0B4J2E0 115 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 A0A1B0GWA3 101 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 A0A1B0GX12 115 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 CLCA1A8K7I4 914 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 EBAG9O00559 213 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 EIF1AYO14602 144 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 TNFSF11O14788 317 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 ST8SIA5O15466 376 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 GSC2O15499 205 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 PDE5AO76074 875 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 ZNF682O95780 498 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 AVPP01185 164 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 OPN1LWP04000 364 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 GLI4P10075 376 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 PNMTP11086 282 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 TNFRSF1BP20333 461 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 OR1E2P47887 323 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 PER3P56645 1201 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 IFI44LQ53G44 452 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 SYT14P1Q58G82 188 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 ENTPD8Q5MY95 495 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 HBMQ6B0K9 141 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 POMZP3Q6PJE2 187 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 RPTNQ6XPR3 784 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 VTCN1Q7Z7D3 282 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 ATP6V1C2Q8NEY4 427 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 OR10Q1Q8NGQ4 319 aa10.69□□□□□ -0.7
PDLIM5-208ENST00000504489 OR10D3Q8NH80 312 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms