RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 SLC13A4Q9UKG4 626 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 SSR3Q9UNL2 185 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 IGHV1OR15-9A0A0B4J2B8 117 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 OR5K4A6NMS3 321 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 B4DGG1 531 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 E9PI62 339 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 CT45A8P0DMV1 189 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 CT45A9P0DMV2 189 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 S100A5P33763 92 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 SOX6P35712 828 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 GCGRP47871 477 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.47□□□□□ -1.37
SNX25-202ENST00000504273 HNRNPA0Q13151 305 aaKnown RBP6.47□□□□□ -1.37
SNX25-202ENST00000504273 NDUFAF6Q330K2 333 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 EIPR1Q53HC9 387 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 CT45A2Q5DJT8 189 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 SLC35F1Q5T1Q4 408 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 ZNF322Q6U7Q0 402 aaPredicted RBP6.47□□□□□ -1.37
SNX25-202ENST00000504273 RNF113BQ8IZP6 322 aaKnown RBP6.47□□□□□ -1.37
SNX25-202ENST00000504273 VWA5B2Q8N398 1253 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 OR2T33Q8NG76 320 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 CHAC2Q8WUX2 184 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 ZNRF4Q8WWF5 429 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 MAP3K3Q99759 626 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 KLHDC3Q9BQ90 382 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 RNF32Q9H0A6 362 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 MCCC2Q9HCC0 563 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 MN1Q10571 1320 aaPredicted RBP6.47□□□□□ -1.37
SNX25-202ENST00000504273 PCNX3Q9H6A9 2034 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 FER1L5A0AVI2 2057 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 TRAV27A0A087WT01 109 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 A0A1B0GWA3 101 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 TRDV1A0A1B0GX56 115 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 NCR1O76036 304 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 PTTG1O95997 202 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 GUSBP08236 651 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 GAAP10253 952 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 GABRA5P31644 462 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 GPR3P46089 330 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 UBXN2BQ14CS0 331 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 CXXC5Q7LFL8 322 aaKnown RBP6.47□□□□□ -1.37
SNX25-202ENST00000504273 LAPTM4BQ86VI4 370 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 RANBP3LQ86VV4 465 aaPredicted RBP6.47□□□□□ -1.37
SNX25-202ENST00000504273 OOSP2Q86WS3 158 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 C17orf82Q86X59 251 aaPredicted RBP6.47□□□□□ -1.37
SNX25-202ENST00000504273 ARL14Q8N4G2 192 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 RFLNBQ8N5W9 214 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 ZNF615Q8N8J6 731 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 RCBTB1Q8NDN9 531 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 BPIFA2Q96DR5 249 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 LMF1Q96S06 567 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 RERGLQ9H628 205 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 TOR4AQ9NXH8 423 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 LRIT1Q9P2V4 623 aa6.47□□□□□ -1.37
SNX25-202ENST00000504273 MPDZO75970 2070 aa6.46□□□□□ -1.37
SNX25-202ENST00000504273 DMXL1Q9Y485 3027 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 ATP6V1G2-DDX39BF2Z307 99 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 LOC110117498-PIK3R3F6TDL0 507 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 IMPA2O14732 288 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 SEC14L5O43304 696 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 CDC123O75794 336 aaPredicted RBP6.46□□□□□ -1.38
SNX25-202ENST00000504273 TSPAN19P0C672 248 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 ZNF10P21506 573 aaPredicted RBP6.46□□□□□ -1.38
SNX25-202ENST00000504273 P2RX3P56373 397 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 CTAG1AP78358 180 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 C1DQ13901 141 aaKnown RBP6.46□□□□□ -1.38
SNX25-202ENST00000504273 ZNF141Q15928 474 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 NDUFA5Q16718 116 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 AMZ1Q400G9 498 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 CRTC2Q53ET0 693 aaPredicted RBP6.46□□□□□ -1.38
SNX25-202ENST00000504273 CCBE1Q6UXH8 406 aaPredicted RBP6.46□□□□□ -1.38
SNX25-202ENST00000504273 MEPCEQ7L2J0 689 aaKnown RBP6.46□□□□□ -1.38
SNX25-202ENST00000504273 SYT13Q7L8C5 426 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 RRM2BQ7LG56 351 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 CADM2Q8N3J6 435 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 OR52N1Q8NH53 320 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 FANK1Q8TC84 345 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 DNAJA4Q8WW22 397 aaPredicted RBP6.46□□□□□ -1.38
SNX25-202ENST00000504273 MSANTD3Q96H12 275 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 PEX11GQ96HA9 241 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 TNFRSF13CQ96RJ3 184 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 ATF6BQ99941 703 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 TPSD1Q9BZJ3 242 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 POLE3Q9NRF9 147 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 DDX28Q9NUL7 540 aaKnown RBP6.46□□□□□ -1.38
SNX25-202ENST00000504273 CRNNQ9UBG3 495 aaPredicted RBP6.46□□□□□ -1.38
SNX25-202ENST00000504273 CMAHPQ9Y471 501 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 A0A1W2PQL4 384 aaPredicted RBP6.46□□□□□ -1.38
SNX25-202ENST00000504273 A8MV72 311 aaPredicted RBP6.46□□□□□ -1.38
SNX25-202ENST00000504273 MYL12AP19105 171 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 MAOAP21397 527 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 EVI2BP34910 448 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 GFERP55789 205 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 ZNF85Q03923 595 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 ZNF613Q6PF04 617 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 KIRREL2Q6UWL6 708 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 SSX6Q7RTT6 188 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 PARGQ86W56 976 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 KLBQ86Z14 1044 aa6.46□□□□□ -1.38
SNX25-202ENST00000504273 ZNF321PQ8N8H1 164 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms