RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 TAF1P21675 1872 aa15.42■□□□□ 0.06
PCDHA1-203ENST00000504120 VASPP50552 380 aaPredicted RBP15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 TAS2R20P59543 309 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 METAP1DQ6UB28 335 aaPredicted RBP15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 GAREM2Q75VX8 874 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 PTRH1Q86Y79 214 aaKnown RBP15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 OR13C2Q8NGS9 318 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 FNDC9Q8TBE3 224 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 LOC105369274A0A096LPK9 316 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 FAM230AA0A1W2PPH8 454 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 CACNG3O60359 315 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 SPDEFO95238 335 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 KCNK5O95279 499 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 TAS2R19P59542 299 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 TGFBR3Q03167 851 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 GPR19Q15760 415 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 AADACL4Q5VUY2 407 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 MBOAT2Q6ZWT7 520 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 OR4N4Q8N0Y3 316 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 FAM160A2Q8N612 972 aaPredicted RBP15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 SORCS2Q96PQ0 1159 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 CXCL16Q9H2A7 254 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 USP22Q9UPT9 525 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 MOKQ9UQ07 419 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 DVL2O14641 736 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 P2RX6O15547 441 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 BCL7AQ4VC05 210 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 VASNQ6EMK4 673 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 MAVSQ7Z434 540 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 CLEC1AQ8NC01 280 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 STEAP2Q8NFT2 490 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 OR14K1Q8NGZ2 314 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 RNF128Q8TEB7 428 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 GCDHQ92947 438 aaPredicted RBP15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 ENKD1Q9H0I2 346 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 NOX3Q9HBY0 568 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 A4GALTQ9NPC4 353 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 STRCP1A6NGW2 1772 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 SLCO2B1O94956 709 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 ALDOBP05062 364 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 GDF1P27539 372 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 POU3F1Q03052 451 aaPredicted RBP15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 SQSTM1Q13501 440 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 ZBP1Q9H171 429 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 TSPAN10Q9H1Z9 355 aaPredicted RBP15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 PLEKHA3Q9HB20 300 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 PDE4DIPQ5VU43 2346 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 LAMB1P07942 1786 aa15.41■□□□□ 0.06
PCDHA1-203ENST00000504120 SEC14L2O76054 403 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 POLR2HP52434 150 aaKnown RBP15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 EPHA4P54764 986 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 DLX5P56178 289 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 ERVK-16P61578 105 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 UBE2NLQ5JXB2 153 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 RFLNAQ6ZTI6 216 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 MMP21Q8N119 569 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 PELI3Q8N2H9 469 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 PSORS1C1Q9UIG5 152 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 NUDT21O43809 227 aaKnown RBP15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 ABLIM3O94929 683 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 CXADRP78310 365 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 LTBQ06643 244 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 ILKQ13418 452 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 OR1S1Q8NH92 325 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 RLN3Q8WXF3 142 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 NEURL3Q96EH8 262 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 ZNF578Q96N58 590 aaPredicted RBP15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 MAP3K3Q99759 626 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 ASF1BQ9NVP2 202 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 CCL26Q9Y258 94 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 SYT5O00445 386 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 YY2O15391 372 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 GIFP27352 417 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 PKLRP30613 574 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 ERVFC1P60507 584 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 ARG2P78540 354 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 MZT1Q08AG7 82 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 RAB31Q13636 194 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 ERV3-1Q14264 604 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 ZNF169Q14929 603 aaPredicted RBP15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 OR2G6Q5TZ20 316 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 AGAP6Q5VW22 663 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 RSC1A1Q92681 617 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 HHIPL1Q96JK4 782 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 HRASLS5Q96KN8 279 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 AGAP4Q96P64 663 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 SLC22A12Q96S37 553 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 VSX1Q9NZR4 365 aaPredicted RBP15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 CA5BQ9Y2D0 317 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 NSG1A0A0A6YYJ2 146 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 PTPN6P29350 595 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 NIPAL3Q6P499 406 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 LILRA2Q8N149 483 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 CNTNAP3BQ96NU0 1288 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 NICN1Q9BSH3 213 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 KLK4Q9Y5K2 254 aa15.4■□□□□ 0.06
PCDHA1-203ENST00000504120 CER1O95813 267 aa15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 HNRNPFP52597 415 aaKnown RBP15.39■□□□□ 0.05
PCDHA1-203ENST00000504120 IL13RA1P78552 427 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms