RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 PPOXP50336 477 aa2.54□□□□□ -2
SUB1-204ENST00000504016 HNRNPA3P51991 378 aaKnown RBP2.54□□□□□ -2
SUB1-204ENST00000504016 ARL6IP1Q15041 203 aa2.54□□□□□ -2
SUB1-204ENST00000504016 NSUN5P1Q3KNT7 163 aa2.54□□□□□ -2
SUB1-204ENST00000504016 RABGAP1LQ5R372 815 aa2.54□□□□□ -2
SUB1-204ENST00000504016 ZNF571Q7Z3V5 609 aaPredicted RBP2.54□□□□□ -2
SUB1-204ENST00000504016 RALGPS2Q86X27 583 aaPredicted RBP2.54□□□□□ -2
SUB1-204ENST00000504016 ZNF573Q86YE8 665 aa2.54□□□□□ -2
SUB1-204ENST00000504016 ZNF786Q8N393 782 aa2.54□□□□□ -2
SUB1-204ENST00000504016 SVOPLQ8N434 492 aa2.54□□□□□ -2
SUB1-204ENST00000504016 MARCH1Q8TCQ1 289 aa2.54□□□□□ -2
SUB1-204ENST00000504016 UBE2Q2Q8WVN8 375 aa2.54□□□□□ -2
SUB1-204ENST00000504016 SRSF12Q8WXF0 261 aaKnown RBP2.54□□□□□ -2
SUB1-204ENST00000504016 ST8SIA1Q92185 356 aa2.54□□□□□ -2
SUB1-204ENST00000504016 STARD4Q96DR4 205 aa2.54□□□□□ -2
SUB1-204ENST00000504016 KCNA7Q96RP8 456 aa2.54□□□□□ -2
SUB1-204ENST00000504016 HOXC10Q9NYD6 342 aa2.54□□□□□ -2
SUB1-204ENST00000504016 SIGLEC8Q9NYZ4 499 aa2.54□□□□□ -2
SUB1-204ENST00000504016 AIPL1Q9NZN9 384 aa2.54□□□□□ -2
SUB1-204ENST00000504016 SF3B1O75533 1304 aaKnown RBP eCLIP2.53□□□□□ -2
SUB1-204ENST00000504016 A0A0G2JLM5 398 aa2.53□□□□□ -2
SUB1-204ENST00000504016 MAPK13O15264 365 aa2.53□□□□□ -2
SUB1-204ENST00000504016 MAGEB4O15481 346 aaPredicted RBP2.53□□□□□ -2
SUB1-204ENST00000504016 CLDN3O15551 220 aa2.53□□□□□ -2
SUB1-204ENST00000504016 ZSCAN12O43309 604 aa2.53□□□□□ -2
SUB1-204ENST00000504016 MBTPS2O43462 519 aa2.53□□□□□ -2
SUB1-204ENST00000504016 KIAA0754O94854 1291 aa2.53□□□□□ -2
SUB1-204ENST00000504016 MOSP00540 346 aa2.53□□□□□ -2
SUB1-204ENST00000504016 OPN1MWP04001 364 aa2.53□□□□□ -2
SUB1-204ENST00000504016 OPN1MW2P0DN77 364 aa2.53□□□□□ -2
SUB1-204ENST00000504016 OPN1MW3P0DN78 364 aa2.53□□□□□ -2
SUB1-204ENST00000504016 EPB41P11171 864 aaKnown RBP2.53□□□□□ -2
SUB1-204ENST00000504016 ATP6V1C1P21283 382 aa2.53□□□□□ -2
SUB1-204ENST00000504016 UQCRC2P22695 453 aa2.53□□□□□ -2
SUB1-204ENST00000504016 PAX7P23759 505 aa2.53□□□□□ -2
SUB1-204ENST00000504016 PRDX3P30048 256 aaKnown RBP2.53□□□□□ -2
SUB1-204ENST00000504016 HTR1FP30939 366 aa2.53□□□□□ -2
SUB1-204ENST00000504016 LHX2P50458 406 aa2.53□□□□□ -2
SUB1-204ENST00000504016 GPRC6AQ5T6X5 926 aa2.53□□□□□ -2
SUB1-204ENST00000504016 TPGS2Q68CL5 300 aa2.53□□□□□ -2
SUB1-204ENST00000504016 AFTPHQ6ULP2 937 aa2.53□□□□□ -2
SUB1-204ENST00000504016 ACP7Q6ZNF0 438 aa2.53□□□□□ -2
SUB1-204ENST00000504016 RFLNAQ6ZTI6 216 aa2.53□□□□□ -2
SUB1-204ENST00000504016 OSTF1Q92882 214 aa2.53□□□□□ -2
SUB1-204ENST00000504016 RIT2Q99578 217 aa2.53□□□□□ -2
SUB1-204ENST00000504016 HDHD3Q9BSH5 251 aaPredicted RBP2.53□□□□□ -2
SUB1-204ENST00000504016 THUMPD2Q9BTF0 503 aaKnown RBP2.53□□□□□ -2
SUB1-204ENST00000504016 SLC25A22Q9H936 323 aa2.53□□□□□ -2
SUB1-204ENST00000504016 ELOVL3Q9HB03 270 aa2.53□□□□□ -2
SUB1-204ENST00000504016 PATZ1Q9HBE1 687 aaKnown RBP2.53□□□□□ -2
SUB1-204ENST00000504016 TAS2R3Q9NYW6 316 aa2.53□□□□□ -2
SUB1-204ENST00000504016 ASF1AQ9Y294 204 aa2.53□□□□□ -2
SUB1-204ENST00000504016 U3KQV3 271 aa2.53□□□□□ -2
SUB1-204ENST00000504016 V9GY05 133 aa2.53□□□□□ -2
SUB1-204ENST00000504016 HIP1O00291 1037 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 FAM189A1O60320 539 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 B3GALNT1O75752 331 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 PCCAP05165 728 aaPredicted RBP2.52□□□□□ -2.01
SUB1-204ENST00000504016 NT5EP21589 574 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 DAP3P51398 398 aaKnown RBP2.52□□□□□ -2.01
SUB1-204ENST00000504016 AP3M2P53677 418 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 BPIFB3P59826 476 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 HTD2P86397 168 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 GPNMBQ14956 572 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 PTGES3Q15185 160 aaKnown RBP2.52□□□□□ -2.01
SUB1-204ENST00000504016 NRF1Q16656 503 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 TFDP3Q5H9I0 405 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 TMIGD1Q6UXZ0 262 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 ZNF429Q86V71 674 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 C6orf223Q8N319 242 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 FTMTQ8N4E7 242 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 FADS6Q8N9I5 356 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 OR4D9Q8NGE8 314 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 OR10T2Q8NGX3 314 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 SPRYD4Q8WW59 207 aaPredicted RBP2.52□□□□□ -2.01
SUB1-204ENST00000504016 CTNNBL1Q8WYA6 563 aaPredicted RBP2.52□□□□□ -2.01
SUB1-204ENST00000504016 ARPC1AQ92747 370 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 RNF185Q96GF1 192 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 PLGRKTQ9HBL7 147 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 IL36GQ9NZH8 169 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 PHF11Q9UIL8 331 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 STAP1Q9ULZ2 295 aa2.52□□□□□ -2.01
SUB1-204ENST00000504016 IGHV3OR16-13A0A075B7E8 117 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 SMPD2O60906 423 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 STAMBPO95630 424 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 KRT13P13646 458 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 CXCR2P25025 360 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 SHMT2P34897 504 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 CA8P35219 290 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 CD86P42081 329 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 VDAC2P45880 294 aaPredicted RBP2.51□□□□□ -2.01
SUB1-204ENST00000504016 ACADVLP49748 655 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 SH3BGRP55822 239 aaPredicted RBP2.51□□□□□ -2.01
SUB1-204ENST00000504016 TAS2R19P59542 299 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 EBI3Q14213 229 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 HSP90AA5PQ58FG0 334 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 CLEC4FQ8N1N0 589 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 OR9G1Q8NH87 305 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 RAET1EQ8TD07 263 aa2.51□□□□□ -2.01
SUB1-204ENST00000504016 BRSK1Q8TDC3 778 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms