RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 JADE3Q92613 823 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 NEUROG1Q92886 237 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 TESCQ96BS2 214 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF524Q96C55 264 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF300Q96RE9 604 aaPredicted RBP5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 FKRPQ9H9S5 495 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 YAE1D1Q9NRH1 226 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 NOP53Q9NZM5 478 aaKnown RBP5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 TMEM181Q9P2C4 612 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 KCNE5Q9UJ90 142 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 GDF2Q9UK05 429 aaPredicted RBP5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 SLC9A8Q9Y2E8 581 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 NOSIPQ9Y314 301 aaKnown RBP5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 PTGDR2Q9Y5Y4 395 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 KCNE3Q9Y6H6 103 aa5.37□□□□□ -1.55
LSM3P4-201ENST00000502948 IGHV4-30-2A0A087WSY4 118 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 A0A096LPI6 279 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 PRSS51A0A1B0GVH4 220 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 FAM234BA2RU67 622 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 OR6C65A6NJZ3 312 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 SSX4O60224 188 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 FCMRO60667 390 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 FZD7O75084 574 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 PEX11AO75192 247 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 NDUFS7O75251 213 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 MRPL33O75394 65 aaKnown RBP5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 VAMP5O95183 116 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 CSTAP01040 98 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 CHRNGP07510 517 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 ITGA5P08648 1049 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 HOXB1P14653 301 aaPredicted RBP5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 UQCRC2P22695 453 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 EDNRAP25101 427 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 ALDH3A1P30838 453 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 GZMKP49863 264 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 SLC35A1P78382 337 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 KCNJ10P78508 379 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 POU3F1Q03052 451 aaPredicted RBP5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 TSC22D1Q15714 1073 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 STK11Q15831 433 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 GSTA3Q16772 222 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 SPDYE7PQ495Y7 208 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 ANXA8L1Q5VT79 327 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 IL23RQ5VWK5 629 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 CYB5R2Q6BCY4 276 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 SLC22A25Q6T423 547 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 PAQR6Q6TCH4 344 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 ATG4DQ86TL0 474 aaPredicted RBP5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 ADGRG3Q86Y34 549 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 DDIASQ8IXT1 998 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF619Q8N2I2 560 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 POMGNT2Q8NAT1 580 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 FNDC5Q8NAU1 212 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF540Q8NDQ6 660 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 CLHC1Q8NHS4 586 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 MAGEE2Q8TD90 523 aaPredicted RBP5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 FAM168AQ92567 244 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 SLC35B4Q969S0 331 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 NEURL3Q96EH8 262 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 CHMP6Q96FZ7 201 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 OR5B2Q96R09 309 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 CACNG6Q9BXT2 260 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 ROPN1BQ9BZX4 212 aaPredicted RBP5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 SERHL2Q9H4I8 314 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 ROPN1Q9HAT0 212 aaPredicted RBP5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 CRNNQ9UBG3 495 aaPredicted RBP5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 LGALS13Q9UHV8 139 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 HAO1Q9UJM8 370 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 FLVCR1Q9Y5Y0 555 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 PMF1-BGLAPU3KQ54 211 aa5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.36□□□□□ -1.55
LSM3P4-201ENST00000502948 STAB1Q9NY15 2570 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 MALRD1Q5VYJ5 2156 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ARPC4-TTLL3A0A0A6YYG9 625 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 IGHV3-15A0A0B4J1V0 119 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 NPIPA5A0A0B4J1W7 369 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 LOC390937A0A1W2PQ73 354 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 CIB4A0PJX0 185 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 TMEM233B4DJY2 109 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 NPIPA7E9PJI5 369 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 PHF1O43189 567 aaPredicted RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 GPRIN2O60269 458 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 RAD51DO75771 328 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 WNT11O96014 354 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 SHBGP04278 402 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 NPIPA8P0DM63 369 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 G6PDP11413 515 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 UQCRBP14927 111 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 RPS4Y1P22090 263 aaKnown RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 USF1P22415 310 aaPredicted RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 GIFP27352 417 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 MPGP29372 298 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 NTF4P34130 210 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 SLC1A3P43003 542 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ETV4P43268 484 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 ANXA11P50995 505 aaKnown RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 CLNS1AP54105 237 aaKnown RBP5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 CASP9P55211 416 aa5.35□□□□□ -1.55
LSM3P4-201ENST00000502948 PRPS1P60891 318 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms